Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HOXA9P31269 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HOXA9P31269 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
HOXA9P31269 RNU1-18P-201ENST00000363062 164 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 OR6K3-202ENST00000368146 996 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 MIR320B1-201ENST00000390209 79 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 HMGN2P8-201ENST00000391458 268 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 NDUFB4P4-201ENST00000404822 243 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 Z92545.1-201ENST00000411782 234 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXA9P31269 AL512504.1-201ENST00000415494 778 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 MRPS33P4-201ENST00000434892 317 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 CYCSP32-201ENST00000440548 321 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 BTBD7P2-201ENST00000441962 620 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 CCRL1P1-201ENST00000449542 1053 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 CEACAMP4-201ENST00000457676 421 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 OR52A4P-202ENST00000481634 799 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AC073522.1-201ENST00000483312 377 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AP001086.1-201ENST00000494882 321 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 RN7SKP57-201ENST00000517248 293 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 AP000926.4-201ENST00000527351 454 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.74□□□□□ -1.81
HOXA9P31269 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
HOXA9P31269 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 VN1R92P-201ENST00000598511 928 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 MIR8058-201ENST00000615737 89 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AC003001.2-201ENST00000616294 831 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AL118508.4-201ENST00000624142 1176 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 AP003072.4-201ENST00000624580 310 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 NCAPGP1-201ENST00000505112 1814 ntBASIC3.74□□□□□ -1.81
HOXA9P31269 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA9P31269 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA9P31269 MFSD8-233ENST00000641482 4860 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA9P31269 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 RNU4-35P-201ENST00000362588 141 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HOXA9P31269 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HOXA9P31269 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HOXA9P31269 AL138878.1-201ENST00000405131 347 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXA9P31269 AL159169.1-201ENST00000421119 127 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 SDCBPP2-201ENST00000424643 885 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 RPL21P110-201ENST00000433345 446 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 Z99127.2-201ENST00000441426 334 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AL591503.2-201ENST00000442314 1005 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXA9P31269 AL513343.1-201ENST00000451818 792 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 TPRKBP1-201ENST00000456243 481 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 RNU7-27P-201ENST00000459281 62 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 RPL5P24-201ENST00000463742 885 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC023598.1-201ENST00000472521 361 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC017015.1-201ENST00000477387 286 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 TRAV15-201ENST00000556680 249 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC092868.3-201ENST00000560515 784 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 GTF2IP8-201ENST00000560687 584 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC079880.2-201ENST00000603790 1213 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC005000.2-201ENST00000605468 310 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 YPEL5P2-201ENST00000605553 359 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AC015802.5-201ENST00000607478 399 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 AL391834.1-201ENST00000609609 560 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXA9P31269 AC119674.1-220ENST00000641502 1048 ntBASIC3.73□□□□□ -1.81
HOXA9P31269 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HOXA9P31269 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA9P31269 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA9P31269 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA9P31269 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA9P31269 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms