Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC006213.5-201ENST00000619673 288 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.78□□□□□ -1.8
XRCC1P18887 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
XRCC1P18887 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
XRCC1P18887 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
XRCC1P18887 AC119744.1-201ENST00000454746 1715 ntBASIC3.78□□□□□ -1.8
XRCC1P18887 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
XRCC1P18887 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.81
XRCC1P18887 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
XRCC1P18887 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
XRCC1P18887 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
XRCC1P18887 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.77□□□□□ -1.81
XRCC1P18887 EXOC5P1-201ENST00000510543 1969 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 OR4A15-201ENST00000314706 1035 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
XRCC1P18887 RNU1-85P-201ENST00000364127 164 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 MIR199A2-201ENST00000385289 110 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AP002784.2-201ENST00000397300 549 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.77□□□□□ -1.81
XRCC1P18887 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
XRCC1P18887 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.77□□□□□ -1.81
XRCC1P18887 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 SNORA84-201ENST00000459229 133 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC096992.1-201ENST00000459808 709 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 HMGB1P21-201ENST00000502313 581 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.77□□□□□ -1.81
XRCC1P18887 AC021146.1-201ENST00000511202 716 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.77□□□□□ -1.81
XRCC1P18887 RNA5SP164-201ENST00000516533 110 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 RNU1-45P-201ENST00000517191 141 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 OR4R2P-201ENST00000530815 597 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AP000916.1-201ENST00000533869 835 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.77□□□□□ -1.81
XRCC1P18887 AC092747.2-201ENST00000545069 983 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AGGF1P8-201ENST00000562979 1000 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
XRCC1P18887 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.77□□□□□ -1.81
XRCC1P18887 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.77□□□□□ -1.81
XRCC1P18887 AC112230.1-201ENST00000604342 547 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 Z82195.1-201ENST00000604558 398 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC245389.1-201ENST00000605141 529 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC005972.3-201ENST00000606304 481 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.77□□□□□ -1.81
XRCC1P18887 AC073530.2-201ENST00000623987 261 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AC091905.1-201ENST00000624400 311 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 AP003400.6-201ENST00000624698 740 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.77□□□□□ -1.81
XRCC1P18887 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
XRCC1P18887 AC090229.1-201ENST00000590983 1609 ntBASIC3.77□□□□□ -1.81
XRCC1P18887 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
XRCC1P18887 AL122126.1-201ENST00000546905 1318 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
XRCC1P18887 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
XRCC1P18887 AP004289.2-201ENST00000444413 1457 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
XRCC1P18887 RNU6-1339P-201ENST00000363574 91 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
XRCC1P18887 OR6K3-202ENST00000368146 996 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 HLFP1-201ENST00000402375 499 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC004022.2-201ENST00000413824 193 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.76□□□□□ -1.81
XRCC1P18887 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
XRCC1P18887 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 AC008379.1-201ENST00000463655 464 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC104689.1-201ENST00000473356 768 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 RPL21P129-201ENST00000491732 478 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.76□□□□□ -1.81
XRCC1P18887 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.76□□□□□ -1.81
XRCC1P18887 AC008494.2-201ENST00000514544 370 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC093853.1-201ENST00000515689 483 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 RNU6-352P-201ENST00000516908 107 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 HMGB1P23-201ENST00000518743 568 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 AL161713.1-201ENST00000555538 145 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 AC090877.1-201ENST00000561418 344 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC095057.3-201ENST00000567102 1157 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.76□□□□□ -1.81
XRCC1P18887 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.76□□□□□ -1.81
XRCC1P18887 AC096586.1-201ENST00000610267 561 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC005344.1-201ENST00000613391 459 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 VN1R9P-201ENST00000614184 867 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 AC017104.5-201ENST00000637647 639 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
XRCC1P18887 MAPK10-372ENST00000641954 3413 ntBASIC3.76□□□□□ -1.81
XRCC1P18887 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 AC104446.1-201ENST00000613728 1321 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
XRCC1P18887 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 AL512646.1-201ENST00000269395 1077 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms