Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TCP11X1-202ENST00000622971 1372 ntBASIC6.18□□□□□ -1.42
HOXD8P13378 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD8P13378 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD8P13378 U8.4-201ENST00000363626 134 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RNA5SP514-201ENST00000363717 111 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RNU1-59P-201ENST00000364829 162 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 SNORA33.2-201ENST00000365413 134 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 RNU1-136P-201ENST00000384181 164 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RNU6-43P-201ENST00000384302 107 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 SNORA70.9-201ENST00000384370 135 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RNU2-62P-201ENST00000410868 191 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD8P13378 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 AL807761.1-201ENST00000417622 171 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 AC108075.1-201ENST00000424692 529 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RPL23AP30-201ENST00000432419 501 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 AC002381.1-201ENST00000447049 280 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 HMGN3P1-201ENST00000453847 193 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AL035090.1-201ENST00000454835 332 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 PABPC1P3-201ENST00000469174 459 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AC104563.1-201ENST00000476147 376 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AC078785.3-201ENST00000476607 425 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 RPL38P4-201ENST00000502376 214 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
HOXD8P13378 RNU6-488P-201ENST00000515918 99 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXD8P13378 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD8P13378 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD8P13378 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD8P13378 AP001330.4-201ENST00000604350 154 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 U1.25-201ENST00000614085 162 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AC015712.7-201ENST00000615211 635 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 AL132822.1-201ENST00000617063 513 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 U1.31-201ENST00000620022 160 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 7SK.10-201ENST00000621414 298 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXD8P13378 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD8P13378 OFD1P17-201ENST00000437639 3018 ntBASIC6.17□□□□□ -1.42
HOXD8P13378 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXD8P13378 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD8P13378 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD8P13378 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HOXD8P13378 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 OR5P1P-201ENST00000299512 925 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 RPL7P26-201ENST00000333817 754 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 Y_RNA.445-201ENST00000384168 102 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 RNU6-474P-201ENST00000384243 107 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 RNU6-463P-201ENST00000384340 107 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AL031679.1-201ENST00000400616 525 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 DHFRP6-201ENST00000401776 268 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXD8P13378 TPMTP2-201ENST00000414372 726 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 BEND7P1-201ENST00000422058 457 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD8P13378 SRSF1P1-201ENST00000424058 520 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC002075.1-201ENST00000457396 676 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AC026410.2-201ENST00000460281 156 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 RPL7P22-201ENST00000466005 733 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 MTND4P17-201ENST00000470444 350 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 NDUFB5P1-201ENST00000508134 564 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 Y_RNA.691-201ENST00000516611 103 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD8P13378 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXD8P13378 COX6CP8-201ENST00000522620 226 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 ELOCP31-201ENST00000540463 467 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD8P13378 AL389895.1-201ENST00000554127 252 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXD8P13378 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC006006.1-201ENST00000603082 144 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD8P13378 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD8P13378 U6.101-201ENST00000637707 76 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 AL355488.2-201ENST00000609909 2850 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD8P13378 USP9YP4-201ENST00000424401 1745 ntBASIC6.16□□□□□ -1.42
HOXD8P13378 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HOXD8P13378 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms