Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPL31P13-201ENST00000484151 370 ntBASIC3.85□□□□□ -1.79
TPM1P09493 TMEM248P1-201ENST00000510579 951 ntBASIC3.85□□□□□ -1.79
TPM1P09493 RNA5SP380-201ENST00000517190 98 ntBASIC3.85□□□□□ -1.79
TPM1P09493 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM1P09493 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.85□□□□□ -1.79
TPM1P09493 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.85□□□□□ -1.79
TPM1P09493 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.85□□□□□ -1.79
TPM1P09493 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM1P09493 AC087499.8-201ENST00000578406 226 ntBASIC3.85□□□□□ -1.79
TPM1P09493 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM1P09493 AL445423.1-201ENST00000609941 536 ntBASIC3.85□□□□□ -1.79
TPM1P09493 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM1P09493 MIR6820-201ENST00000611508 62 ntBASIC3.85□□□□□ -1.79
TPM1P09493 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.85□□□□□ -1.79
TPM1P09493 U6.48-201ENST00000618523 106 ntBASIC3.85□□□□□ -1.79
TPM1P09493 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM1P09493 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TPM1P09493 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM1P09493 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
TPM1P09493 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
TPM1P09493 CASKP1-201ENST00000412870 582 ntBASIC3.84□□□□□ -1.79
TPM1P09493 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TPM1P09493 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 CKS1BP5-201ENST00000434172 273 ntBASIC3.84□□□□□ -1.79
TPM1P09493 Z85994.2-201ENST00000434327 452 ntBASIC3.84□□□□□ -1.79
TPM1P09493 HMGB1P45-201ENST00000435986 653 ntBASIC3.84□□□□□ -1.79
TPM1P09493 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 TPT1P13-201ENST00000449760 499 ntBASIC3.84□□□□□ -1.79
TPM1P09493 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 PCNAP1-201ENST00000505363 709 ntBASIC3.84□□□□□ -1.79
TPM1P09493 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 AC104027.1-201ENST00000521887 300 ntBASIC3.84□□□□□ -1.79
TPM1P09493 C1GALT1P3-201ENST00000522049 819 ntBASIC3.84□□□□□ -1.79
TPM1P09493 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TPM1P09493 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM1P09493 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM1P09493 AL354798.1-201ENST00000622505 329 ntBASIC3.84□□□□□ -1.79
TPM1P09493 MIR4496-201ENST00000635896 61 ntBASIC3.84□□□□□ -1.79
TPM1P09493 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TPM1P09493 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
TPM1P09493 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.84□□□□□ -1.8
TPM1P09493 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.84□□□□□ -1.8
TPM1P09493 MFSD8-233ENST00000641482 4860 ntBASIC3.84□□□□□ -1.8
TPM1P09493 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
TPM1P09493 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TPM1P09493 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM1P09493 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TPM1P09493 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TPM1P09493 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM1P09493 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TPM1P09493 U3.11-201ENST00000364476 212 ntBASIC3.83□□□□□ -1.8
TPM1P09493 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
TPM1P09493 XKRYP4-201ENST00000414395 483 ntBASIC3.83□□□□□ -1.8
TPM1P09493 LINC01881-201ENST00000416103 412 ntBASIC3.83□□□□□ -1.8
TPM1P09493 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM1P09493 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.83□□□□□ -1.8
TPM1P09493 RPL21P89-201ENST00000444021 467 ntBASIC3.83□□□□□ -1.8
TPM1P09493 TPTE2P6-202ENST00000445572 1007 ntBASIC3.83□□□□□ -1.8
TPM1P09493 XKRYP5-201ENST00000449659 483 ntBASIC3.83□□□□□ -1.8
TPM1P09493 AL133162.1-201ENST00000463228 453 ntBASIC3.83□□□□□ -1.8
TPM1P09493 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM1P09493 AC010265.1-201ENST00000513509 211 ntBASIC3.83□□□□□ -1.8
TPM1P09493 AC016550.3-201ENST00000515706 767 ntBASIC3.83□□□□□ -1.8
TPM1P09493 RN7SKP277-201ENST00000516895 283 ntBASIC3.83□□□□□ -1.8
TPM1P09493 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.83□□□□□ -1.8
TPM1P09493 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM1P09493 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.83□□□□□ -1.8
TPM1P09493 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.83□□□□□ -1.8
TPM1P09493 AC011468.4-201ENST00000603942 409 ntBASIC3.83□□□□□ -1.8
TPM1P09493 AC090425.2-201ENST00000608818 501 ntBASIC3.83□□□□□ -1.8
TPM1P09493 AC010435.1-201ENST00000623353 1177 ntBASIC3.83□□□□□ -1.8
TPM1P09493 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.83□□□□□ -1.8
TPM1P09493 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
TPM1P09493 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TPM1P09493 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TPM1P09493 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TPM1P09493 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TPM1P09493 AP000567.1-201ENST00000406413 156 ntBASIC3.82□□□□□ -1.8
TPM1P09493 RNU6-628P-201ENST00000410675 107 ntBASIC3.82□□□□□ -1.8
TPM1P09493 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.82□□□□□ -1.8
TPM1P09493 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 SETP5-201ENST00000437270 562 ntBASIC3.82□□□□□ -1.8
TPM1P09493 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 HSFY6P-201ENST00000445573 403 ntBASIC3.82□□□□□ -1.8
TPM1P09493 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TPM1P09493 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM1P09493 HMGB3P15-201ENST00000507326 574 ntBASIC3.82□□□□□ -1.8
TPM1P09493 CDH12P4-201ENST00000517835 295 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms