Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC006840.1-201ENST00000623069 542 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 NSRP1P1-201ENST00000444067 1693 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOAP06340 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOAP06340 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC027290.2-201ENST00000623210 18662 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 MAPK10-303ENST00000641324 3959 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC012020.1-201ENST00000624541 1728 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOAP06340 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOAP06340 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC097063.1-201ENST00000426714 1797 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AL121657.1-201ENST00000327215 531 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 RNU6-77P-201ENST00000410554 91 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 RN7SKP263-201ENST00000411194 309 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC114814.2-201ENST00000419195 485 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AL590103.1-201ENST00000434488 307 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AL031667.1-201ENST00000440222 725 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 COX6CP18-201ENST00000448769 222 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 MTCYBP1-201ENST00000454315 1119 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 TPT1P7-201ENST00000458300 517 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 TRBV8-2-201ENST00000475637 270 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC079395.1-201ENST00000510981 262 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 IGJP1-201ENST00000522682 475 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AP000873.5-201ENST00000533906 236 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 POLR2KP1-201ENST00000553226 168 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC025884.1-201ENST00000556034 378 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 NPM1P47-201ENST00000560843 856 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 EIF1P4-201ENST00000572664 335 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC107982.3-201ENST00000584957 985 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC079089.3-201ENST00000603094 673 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC087241.4-201ENST00000612441 480 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC100793.4-201ENST00000613683 429 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 ZYXP1-201ENST00000617638 118 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 PCMTD1P7-201ENST00000634506 357 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DOAP06340 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOAP06340 AC109315.1-201ENST00000584143 1347 ntBASIC5.19□□□□□ -1.58
HLA-DOAP06340 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC116158.1-201ENST00000560231 2129 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOAP06340 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 RNU6-1119P-201ENST00000384349 108 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 SNORD65.1-201ENST00000390889 71 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AC104297.1-201ENST00000393779 870 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 TAF9BP1-201ENST00000396646 746 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 ATP5F1P4-201ENST00000397288 746 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 PEX12P1-201ENST00000400284 1048 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 RPL17P36-201ENST00000420302 549 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 AL357520.1-201ENST00000441557 453 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 DDX39BP2-208ENST00000453923 258 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 RPL7P1-201ENST00000468161 747 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 RPL7P9-201ENST00000468715 747 ntBASIC5.18□□□□□ -1.58
HLA-DOAP06340 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOAP06340 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms