Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN1P05114 RN7SKP244-201ENST00000516513 307 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN1P05114 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN1P05114 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 MIR4286-201ENST00000580651 93 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 AL023583.1-201ENST00000607518 1143 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 AC090912.3-201ENST00000609775 533 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 AC243654.2-201ENST00000612843 443 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN1P05114 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN1P05114 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN1P05114 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN1P05114 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN1P05114 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN1P05114 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
HMGN1P05114 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN1P05114 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 RNA5SP283-201ENST00000365604 119 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 RN7SKP156-201ENST00000410308 342 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 RNU6-628P-201ENST00000410675 107 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN1P05114 EI24P1-201ENST00000416584 867 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 OR4F13P-201ENST00000428478 931 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AC104332.2-201ENST00000429959 156 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 YWHAZP7-201ENST00000436906 631 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AC105402.2-201ENST00000438503 358 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 RPL21P2-201ENST00000440049 481 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AL590639.1-201ENST00000456484 337 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN1P05114 AC026402.1-201ENST00000513642 170 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 RNU4-60P-201ENST00000517239 135 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN1P05114 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN1P05114 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN1P05114 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGN1P05114 AC008507.1-201ENST00000587506 734 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AL109653.1-201ENST00000603091 248 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AL355816.1-201ENST00000607951 118 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 AC131902.3-201ENST00000611767 581 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 MIR6875-201ENST00000617506 72 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HMGN1P05114 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN1P05114 AL392088.2-201ENST00000637607 285 ntBASIC3.13□□□□□ -1.91
HMGN1P05114 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN1P05114 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HMGN1P05114 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN1P05114 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN1P05114 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN1P05114 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGN1P05114 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN1P05114 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGN1P05114 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 SNORA7.2-201ENST00000364446 145 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.12□□□□□ -1.91
HMGN1P05114 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGN1P05114 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN1P05114 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN1P05114 RNA5SP344-201ENST00000411081 104 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 AC016712.1-201ENST00000431088 378 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 OR4C10P-201ENST00000434991 931 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 GAPDHP27-201ENST00000447427 1020 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 AC146507.1-201ENST00000468335 354 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 VN1R105P-201ENST00000486595 910 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 ARL4AP2-201ENST00000507378 601 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN1P05114 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN1P05114 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN1P05114 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN1P05114 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HMGN1P05114 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HMGN1P05114 AC011978.2-201ENST00000569835 2054 ntBASIC3.12□□□□□ -1.91
HMGN1P05114 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN1P05114 SNORA70E-201ENST00000384492 135 ntBASIC3.11□□□□□ -1.91
HMGN1P05114 GSTA12P-201ENST00000402398 508 ntBASIC3.11□□□□□ -1.91
HMGN1P05114 RSL24D1P1-201ENST00000404972 493 ntBASIC3.11□□□□□ -1.91
HMGN1P05114 PPIAP31-201ENST00000405422 495 ntBASIC3.11□□□□□ -1.91
HMGN1P05114 AC004022.2-201ENST00000413824 193 ntBASIC3.11□□□□□ -1.91
HMGN1P05114 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN1P05114 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms