Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF40O75150 AL359265.2-201ENST00000434367 631 ntBASIC7.07□□□□□ -1.28
RNF40O75150 FTH1P1-201ENST00000437933 532 ntBASIC7.07□□□□□ -1.28
RNF40O75150 HIGD1AP11-201ENST00000438361 280 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC099799.1-201ENST00000439809 192 ntBASIC7.07□□□□□ -1.28
RNF40O75150 RPL21P89-201ENST00000444021 467 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AL359955.2-201ENST00000445380 353 ntBASIC7.07□□□□□ -1.28
RNF40O75150 EEF1B2P3-201ENST00000447718 678 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC092647.2-201ENST00000452998 253 ntBASIC7.07□□□□□ -1.28
RNF40O75150 Z83838.1-202ENST00000456225 839 ntBASIC7.07□□□□□ -1.28
RNF40O75150 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF40O75150 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF40O75150 RPS27AP18-201ENST00000515536 459 ntBASIC7.07□□□□□ -1.28
RNF40O75150 RN7SKP70-201ENST00000516655 271 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AL049779.3-201ENST00000557141 606 ntBASIC7.07□□□□□ -1.28
RNF40O75150 MIR4271-201ENST00000582451 67 ntBASIC7.07□□□□□ -1.28
RNF40O75150 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 AC104763.2-201ENST00000604179 382 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AL512329.2-201ENST00000607350 548 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC091768.1-201ENST00000609258 930 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC245517.5-201ENST00000611529 162 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AP005212.3-201ENST00000619964 528 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC005514.1-201ENST00000623521 208 ntBASIC7.07□□□□□ -1.28
RNF40O75150 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF40O75150 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF40O75150 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF40O75150 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF40O75150 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF40O75150 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF40O75150 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF40O75150 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF40O75150 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 Y_RNA.274-201ENST00000364714 101 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RNU6-806P-201ENST00000365147 105 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RNU6-317P-201ENST00000384031 107 ntBASIC7.06□□□□□ -1.28
RNF40O75150 SNORA51.6-201ENST00000384151 125 ntBASIC7.06□□□□□ -1.28
RNF40O75150 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF40O75150 RNA5SP198-201ENST00000410376 127 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF40O75150 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
RNF40O75150 AL590632.1-201ENST00000424289 371 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RPL7P37-201ENST00000425095 738 ntBASIC7.06□□□□□ -1.28
RNF40O75150 MTCO3P29-201ENST00000432119 779 ntBASIC7.06□□□□□ -1.28
RNF40O75150 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.06□□□□□ -1.28
RNF40O75150 TMSB4XP3-201ENST00000445144 114 ntBASIC7.06□□□□□ -1.28
RNF40O75150 TIMM8BP2-201ENST00000445940 251 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC005297.2-201ENST00000450430 606 ntBASIC7.06□□□□□ -1.28
RNF40O75150 SNORD5.1-201ENST00000458800 75 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RN7SL654P-201ENST00000479178 292 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RN7SL809P-201ENST00000482040 297 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC020893.1-201ENST00000502452 580 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF40O75150 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF40O75150 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF40O75150 AC097486.1-201ENST00000515331 210 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RNU5B-3P-201ENST00000516601 115 ntBASIC7.06□□□□□ -1.28
RNF40O75150 IGKV2D-23-201ENST00000518179 286 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF40O75150 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF40O75150 AC007537.1-201ENST00000539347 327 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF40O75150 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF40O75150 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF40O75150 AC060771.1-201ENST00000582031 164 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC011494.1-201ENST00000596454 237 ntBASIC7.06□□□□□ -1.28
RNF40O75150 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF40O75150 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF40O75150 AL138960.1-201ENST00000613838 513 ntBASIC7.06□□□□□ -1.28
RNF40O75150 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF40O75150 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF40O75150 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF40O75150 U6.104-201ENST00000637979 90 ntBASIC7.06□□□□□ -1.28
RNF40O75150 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF40O75150 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF40O75150 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF40O75150 TCP11X1-202ENST00000622971 1372 ntBASIC7.06□□□□□ -1.28
RNF40O75150 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF40O75150 AC011460.1-201ENST00000636268 1834 ntBASIC7.06□□□□□ -1.28
RNF40O75150 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF40O75150 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF40O75150 AC104966.1-201ENST00000467010 1464 ntBASIC7.05□□□□□ -1.28
RNF40O75150 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF40O75150 AC105749.1-201ENST00000631338 2008 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 610.6 ms