Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073063.1-201ENST00000434352 607 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.55□□□□□ -2
SSSCA1O60232 XKRYP5-201ENST00000449659 483 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.55□□□□□ -2
SSSCA1O60232 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.55□□□□□ -2
SSSCA1O60232 RNU6-1218P-201ENST00000458990 108 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AC089999.1-201ENST00000460336 374 ntBASIC2.55□□□□□ -2
SSSCA1O60232 HMGB3P15-201ENST00000507326 574 ntBASIC2.55□□□□□ -2
SSSCA1O60232 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.55□□□□□ -2
SSSCA1O60232 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.55□□□□□ -2
SSSCA1O60232 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.55□□□□□ -2
SSSCA1O60232 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.55□□□□□ -2
SSSCA1O60232 FAM106CP-201ENST00000582212 507 ntBASIC2.55□□□□□ -2
SSSCA1O60232 MIR4276-201ENST00000584832 70 ntBASIC2.55□□□□□ -2
SSSCA1O60232 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.55□□□□□ -2
SSSCA1O60232 AC005972.3-201ENST00000606304 481 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AL023583.1-201ENST00000607518 1143 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AC005156.1-201ENST00000613371 573 ntBASIC2.55□□□□□ -2
SSSCA1O60232 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.55□□□□□ -2
SSSCA1O60232 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.55□□□□□ -2
SSSCA1O60232 AL079305.1-201ENST00000623159 3008 ntBASIC2.55□□□□□ -2
SSSCA1O60232 AC019080.5-201ENST00000624891 757 ntBASIC2.55□□□□□ -2
SSSCA1O60232 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSSCA1O60232 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.55□□□□□ -2
SSSCA1O60232 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.55□□□□□ -2
SSSCA1O60232 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSSCA1O60232 MAPK10-362ENST00000641864 4484 ntBASIC2.54□□□□□ -2
SSSCA1O60232 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.54□□□□□ -2
SSSCA1O60232 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SSSCA1O60232 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.54□□□□□ -2
SSSCA1O60232 AC126755.2-208ENST00000327792 462 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC138969.1-213ENST00000331436 462 ntBASIC2.54□□□□□ -2
SSSCA1O60232 RPL21P17-201ENST00000397467 475 ntBASIC2.54□□□□□ -2
SSSCA1O60232 RNA5SP274-201ENST00000410484 108 ntBASIC2.54□□□□□ -2
SSSCA1O60232 RN7SKP123-201ENST00000410732 291 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.54□□□□□ -2
SSSCA1O60232 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.54□□□□□ -2
SSSCA1O60232 TRIM60P18-201ENST00000441518 828 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.54□□□□□ -2
SSSCA1O60232 TPT1P12-201ENST00000448968 492 ntBASIC2.54□□□□□ -2
SSSCA1O60232 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.54□□□□□ -2
SSSCA1O60232 AC091179.1-201ENST00000461606 579 ntBASIC2.54□□□□□ -2
SSSCA1O60232 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.54□□□□□ -2
SSSCA1O60232 PRDX3P4-201ENST00000470828 747 ntBASIC2.54□□□□□ -2
SSSCA1O60232 RPL7P5-201ENST00000471472 736 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC005726.1-201ENST00000494679 427 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC104619.4-201ENST00000510773 249 ntBASIC2.54□□□□□ -2
SSSCA1O60232 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.54□□□□□ -2
SSSCA1O60232 NPM1P41-201ENST00000512920 831 ntBASIC2.54□□□□□ -2
SSSCA1O60232 CDH12P4-201ENST00000517835 295 ntBASIC2.54□□□□□ -2
SSSCA1O60232 CDH12P3-201ENST00000517935 295 ntBASIC2.54□□□□□ -2
SSSCA1O60232 CDH12P1-201ENST00000518435 295 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.54□□□□□ -2
SSSCA1O60232 MTCO1P49-201ENST00000523429 802 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.54□□□□□ -2
SSSCA1O60232 GTF2IP22-201ENST00000554443 182 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.54□□□□□ -2
SSSCA1O60232 U3.45-201ENST00000607547 219 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC004832.5-201ENST00000608677 401 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC084035.1-201ENST00000634543 607 ntBASIC2.54□□□□□ -2
SSSCA1O60232 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.54□□□□□ -2
SSSCA1O60232 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 XPOTP1-201ENST00000443317 2398 ntBASIC2.54□□□□□ -2
SSSCA1O60232 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SSSCA1O60232 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSSCA1O60232 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SSSCA1O60232 AL353743.4-201ENST00000422653 1547 ntBASIC2.53□□□□□ -2
SSSCA1O60232 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 AC025125.1-201ENST00000624743 1922 ntBASIC2.53□□□□□ -2
SSSCA1O60232 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSSCA1O60232 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 AC110754.1-201ENST00000399740 601 ntBASIC2.53□□□□□ -2
SSSCA1O60232 RPL7P46-201ENST00000425129 740 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.53□□□□□ -2
SSSCA1O60232 AC093151.1-201ENST00000427711 313 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.53□□□□□ -2
SSSCA1O60232 AC007563.3-201ENST00000433233 371 ntBASIC2.53□□□□□ -2
SSSCA1O60232 CBX1P4-201ENST00000439415 457 ntBASIC2.53□□□□□ -2
SSSCA1O60232 RPS27P5-201ENST00000444247 244 ntBASIC2.53□□□□□ -2
SSSCA1O60232 GAPDHP27-201ENST00000447427 1020 ntBASIC2.53□□□□□ -2
SSSCA1O60232 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.53□□□□□ -2
SSSCA1O60232 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.53□□□□□ -2
SSSCA1O60232 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.53□□□□□ -2
SSSCA1O60232 AC007688.1-201ENST00000475592 759 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AC108860.1-201ENST00000484521 383 ntBASIC2.53□□□□□ -2
SSSCA1O60232 RPL5P23-201ENST00000496040 868 ntBASIC2.53□□□□□ -2
SSSCA1O60232 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
SSSCA1O60232 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.53□□□□□ -2
SSSCA1O60232 HPRT1P1-201ENST00000509498 657 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.53□□□□□ -2
SSSCA1O60232 HIGD1AP1-201ENST00000550979 275 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms