Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF3O43395 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PRPF3O43395 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF3O43395 SNORA51.6-201ENST00000384151 125 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 SNORD116-2-201ENST00000384274 95 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 SNORD116-6-201ENST00000384711 96 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 MIR192-201ENST00000384915 110 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PRPF3O43395 GLULP6-201ENST00000399502 913 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 RPS3AP23-201ENST00000401762 784 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 HMGB1P17-201ENST00000403495 628 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AL450338.1-201ENST00000407987 512 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC119751.6-201ENST00000416712 186 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC069213.2-201ENST00000420238 366 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 AL049610.1-201ENST00000423374 372 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 RPEP3-201ENST00000425462 676 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 RPL23AP1-201ENST00000428990 471 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 H2AFZP6-201ENST00000444403 394 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 VN1R10P-201ENST00000447106 875 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 RPL39P6-201ENST00000448289 150 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF3O43395 RPL23AP35-201ENST00000451906 501 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF3O43395 DDX39BP2-208ENST00000453923 258 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF3O43395 RPL7P1-201ENST00000468161 747 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 RPL7P9-201ENST00000468715 747 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PRPF3O43395 RPL30P6-201ENST00000475925 342 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF3O43395 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 AC147055.4-201ENST00000504399 745 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC021146.8-201ENST00000507455 733 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC093281.2-201ENST00000510153 597 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 Y_RNA.688-201ENST00000516565 95 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 HSPA8P13-201ENST00000523715 472 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC239860.2-201ENST00000525886 270 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF3O43395 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF3O43395 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 PTP4A1P6-201ENST00000531034 478 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF3O43395 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF3O43395 AL355812.1-201ENST00000603215 216 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC013444.2-201ENST00000603317 787 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC115286.1-201ENST00000604298 434 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AL513477.2-201ENST00000607858 568 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 MIR6748-201ENST00000610433 71 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 MIR6891-201ENST00000618788 93 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 AC091905.2-201ENST00000623143 306 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF3O43395 MIR3974-201ENST00000637126 96 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 NXPH1-205ENST00000602349 1953 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF3O43395 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF3O43395 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF3O43395 Z73965.1-201ENST00000623412 2297 ntBASIC5.21□□□□□ -1.58
PRPF3O43395 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PRPF3O43395 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 Z98755.1-201ENST00000407015 1384 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF3O43395 FAM91A3P-201ENST00000456826 2544 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF3O43395 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF3O43395 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF3O43395 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PRPF3O43395 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF3O43395 RNU4-40P-201ENST00000364351 143 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 MIR195-201ENST00000385194 87 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 Y_RNA.625-201ENST00000411256 107 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 RPL7AP25-201ENST00000423357 805 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 RPS12P10-201ENST00000427031 377 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 OR4F13P-201ENST00000428478 931 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 AL390023.1-201ENST00000428836 262 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF3O43395 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF3O43395 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 ARPC3P5-201ENST00000448802 534 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 TPT1P13-201ENST00000449760 499 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PRPF3O43395 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF3O43395 AC104685.1-201ENST00000502445 371 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF3O43395 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.2□□□□□ -1.58
PRPF3O43395 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 RN7SKP92-201ENST00000517266 244 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 AC091515.1-201ENST00000548110 679 ntBASIC5.2□□□□□ -1.58
PRPF3O43395 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF3O43395 ATP5J2P6-201ENST00000565203 266 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms