Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNA5SP515-201ENST00000364570 118 ntBASIC5.98□□□□□ -1.45
SOX1O00570 SNORA4.3-201ENST00000365564 137 ntBASIC5.98□□□□□ -1.45
SOX1O00570 U3.23-201ENST00000391132 200 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AL133388.1-201ENST00000404509 287 ntBASIC5.98□□□□□ -1.45
SOX1O00570 PRUNEP1-201ENST00000425846 705 ntBASIC5.98□□□□□ -1.45
SOX1O00570 RPS26P40-201ENST00000435209 294 ntBASIC5.98□□□□□ -1.45
SOX1O00570 HMGB1P18-201ENST00000438801 619 ntBASIC5.98□□□□□ -1.45
SOX1O00570 BX679664.2-201ENST00000439282 283 ntBASIC5.98□□□□□ -1.45
SOX1O00570 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 FGF7P3-201ENST00000454645 303 ntBASIC5.98□□□□□ -1.45
SOX1O00570 SNORD19B-201ENST00000459623 84 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC009127.1-201ENST00000467090 155 ntBASIC5.98□□□□□ -1.45
SOX1O00570 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 AC010587.1-201ENST00000505809 469 ntBASIC5.98□□□□□ -1.45
SOX1O00570 Y_RNA.691-201ENST00000516611 103 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 BTF3P12-201ENST00000519620 469 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 HMGB1P40-201ENST00000525121 540 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC008033.2-201ENST00000542626 177 ntBASIC5.98□□□□□ -1.45
SOX1O00570 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 MTCYBP13-201ENST00000578634 1093 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC011487.3-201ENST00000593607 453 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC010591.1-201ENST00000603941 649 ntBASIC5.98□□□□□ -1.45
SOX1O00570 EIF3FP1-201ENST00000613970 806 ntBASIC5.98□□□□□ -1.45
SOX1O00570 MIR6780A-201ENST00000615089 68 ntBASIC5.98□□□□□ -1.45
SOX1O00570 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 AC005034.3-201ENST00000604845 1747 ntBASIC5.98□□□□□ -1.45
SOX1O00570 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 AC096921.2-201ENST00000561507 1916 ntBASIC5.97□□□□□ -1.45
SOX1O00570 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SOX1O00570 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 Y_RNA.145-201ENST00000363527 102 ntBASIC5.97□□□□□ -1.45
SOX1O00570 RNU6-108P-201ENST00000365558 107 ntBASIC5.97□□□□□ -1.45
SOX1O00570 RPL32P23-201ENST00000397237 405 ntBASIC5.97□□□□□ -1.45
SOX1O00570 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.97□□□□□ -1.45
SOX1O00570 SNORA11.2-201ENST00000408318 127 ntBASIC5.97□□□□□ -1.45
SOX1O00570 RNU2-50P-201ENST00000410494 143 ntBASIC5.97□□□□□ -1.45
SOX1O00570 UQCRBP1-201ENST00000421129 336 ntBASIC5.97□□□□□ -1.45
SOX1O00570 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC093655.2-201ENST00000425735 631 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 SRIP2-201ENST00000428470 166 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC010881.1-201ENST00000433830 235 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX1O00570 RPL38P4-201ENST00000502376 214 ntBASIC5.97□□□□□ -1.45
SOX1O00570 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX1O00570 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX1O00570 RNU6-202P-201ENST00000515998 96 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.97□□□□□ -1.45
SOX1O00570 AC068714.1-201ENST00000559623 800 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX1O00570 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.97□□□□□ -1.45
SOX1O00570 AC006116.10-201ENST00000591836 581 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX1O00570 AL162431.4-201ENST00000604674 411 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AC040896.1-201ENST00000613819 479 ntBASIC5.97□□□□□ -1.45
SOX1O00570 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX1O00570 AC090617.10-201ENST00000624308 134 ntBASIC5.97□□□□□ -1.45
SOX1O00570 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 OR55B1P-203ENST00000641518 2602 ntBASIC5.97□□□□□ -1.45
SOX1O00570 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX1O00570 AC009779.8-201ENST00000641684 4384 ntBASIC5.97□□□□□ -1.45
SOX1O00570 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX1O00570 AC005261.2-201ENST00000593427 4258 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms