Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RTCAO00442 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 RNA5SP295-201ENST00000362655 121 ntBASIC4.04□□□□□ -1.76
RTCAO00442 RNU1-14P-201ENST00000362759 152 ntBASIC4.04□□□□□ -1.76
RTCAO00442 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 U6.112-201ENST00000384129 70 ntBASIC4.04□□□□□ -1.76
RTCAO00442 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.04□□□□□ -1.76
RTCAO00442 AC011933.1-201ENST00000413334 321 ntBASIC4.04□□□□□ -1.76
RTCAO00442 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.04□□□□□ -1.76
RTCAO00442 LIPT1P1-201ENST00000415870 1186 ntBASIC4.04□□□□□ -1.76
RTCAO00442 USP9YP21-201ENST00000420603 432 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.04□□□□□ -1.76
RTCAO00442 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.04□□□□□ -1.76
RTCAO00442 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
RTCAO00442 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
RTCAO00442 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.04□□□□□ -1.76
RTCAO00442 AC005002.1-201ENST00000447458 540 ntBASIC4.04□□□□□ -1.76
RTCAO00442 RPL23AP81-201ENST00000455252 467 ntBASIC4.04□□□□□ -1.76
RTCAO00442 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.04□□□□□ -1.76
RTCAO00442 CFTRP1-201ENST00000456646 183 ntBASIC4.04□□□□□ -1.76
RTCAO00442 CDC42P1-201ENST00000456658 548 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC116533.1-201ENST00000459748 321 ntBASIC4.04□□□□□ -1.76
RTCAO00442 RPS26P28-201ENST00000470806 348 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.04□□□□□ -1.76
RTCAO00442 AC041039.1-201ENST00000485656 536 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC093267.1-201ENST00000489176 961 ntBASIC4.04□□□□□ -1.76
RTCAO00442 RPL35P6-201ENST00000490024 372 ntBASIC4.04□□□□□ -1.76
RTCAO00442 PPBPP1-201ENST00000510807 373 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
RTCAO00442 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.04□□□□□ -1.76
RTCAO00442 RNU6-416P-201ENST00000516265 103 ntBASIC4.04□□□□□ -1.76
RTCAO00442 RN7SKP244-201ENST00000516513 307 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.04□□□□□ -1.76
RTCAO00442 IGKV2D-36-201ENST00000518643 226 ntBASIC4.04□□□□□ -1.76
RTCAO00442 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.04□□□□□ -1.76
RTCAO00442 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.04□□□□□ -1.76
RTCAO00442 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.04□□□□□ -1.76
RTCAO00442 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTCAO00442 TVP23BP1-201ENST00000557500 617 ntBASIC4.04□□□□□ -1.76
RTCAO00442 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC110741.2-201ENST00000605278 268 ntBASIC4.04□□□□□ -1.76
RTCAO00442 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.04□□□□□ -1.76
RTCAO00442 AC016597.2-201ENST00000613256 341 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC023510.2-201ENST00000622162 746 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC006963.1-201ENST00000624003 1052 ntBASIC4.04□□□□□ -1.76
RTCAO00442 AC013437.2-201ENST00000639587 677 ntBASIC4.04□□□□□ -1.76
RTCAO00442 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.04□□□□□ -1.76
RTCAO00442 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTCAO00442 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTCAO00442 FAM3C2-201ENST00000312214 681 ntBASIC4.03□□□□□ -1.76
RTCAO00442 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTCAO00442 MIR649-201ENST00000384843 97 ntBASIC4.03□□□□□ -1.76
RTCAO00442 MIR16-1-201ENST00000385271 89 ntBASIC4.03□□□□□ -1.76
RTCAO00442 PTMAP5-201ENST00000393073 333 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AL121978.1-201ENST00000402778 359 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AP000567.1-201ENST00000406413 156 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.03□□□□□ -1.76
RTCAO00442 RNU4-25P-201ENST00000410569 230 ntBASIC4.03□□□□□ -1.76
RTCAO00442 CRYBB2P1-203ENST00000415709 538 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.03□□□□□ -1.76
RTCAO00442 RBMY1KP-201ENST00000423480 476 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RPL21P66-201ENST00000426566 466 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.03□□□□□ -1.76
RTCAO00442 AC011242.1-201ENST00000433596 1158 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC073143.1-201ENST00000436316 395 ntBASIC4.03□□□□□ -1.76
RTCAO00442 SNORA71B-202ENST00000439232 272 ntBASIC4.03□□□□□ -1.76
RTCAO00442 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.03□□□□□ -1.76
RTCAO00442 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 Z99714.1-201ENST00000450463 807 ntBASIC4.03□□□□□ -1.76
RTCAO00442 NPM1P13-201ENST00000452663 865 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RPS24P6-201ENST00000452670 400 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 RPL7P1-201ENST00000468161 747 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
RTCAO00442 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.03□□□□□ -1.76
RTCAO00442 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 AC008958.1-201ENST00000511047 682 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RN7SKP157-201ENST00000516174 282 ntBASIC4.03□□□□□ -1.76
RTCAO00442 RAB9BP1-201ENST00000519581 626 ntBASIC4.03□□□□□ -1.76
RTCAO00442 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 AC091515.1-201ENST00000548110 679 ntBASIC4.03□□□□□ -1.76
RTCAO00442 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 PSMB7P1-201ENST00000556349 514 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.03□□□□□ -1.76
RTCAO00442 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.03□□□□□ -1.76
RTCAO00442 MTND6P33-201ENST00000571794 183 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC005412.1-201ENST00000580812 1049 ntBASIC4.03□□□□□ -1.76
RTCAO00442 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.03□□□□□ -1.76
RTCAO00442 AL669831.4-202ENST00000590817 238 ntBASIC4.03□□□□□ -1.76
RTCAO00442 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.03□□□□□ -1.76
RTCAO00442 AC091057.3-201ENST00000602684 733 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms