Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ELOCP28-201ENST00000590044 317 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 AL606834.3-201ENST00000602615 496 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AL391834.2-201ENST00000609982 546 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC121761.2-201ENST00000617300 689 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 U73479.1-201ENST00000618062 168 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AC090506.2-201ENST00000624521 419 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 AP003485.1-201ENST00000625093 753 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC188H7C350 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC188H7C350 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 AL133412.1-201ENST00000380194 2992 ntBASIC4.14□□□□□ -1.75
CCDC188H7C350 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
CCDC188H7C350 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC188H7C350 NMD3P1-201ENST00000439704 1488 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 RNU1-132P-201ENST00000364300 164 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RNU6-619P-201ENST00000365146 108 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 ENSAP1-201ENST00000392855 326 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AL139098.1-201ENST00000407291 389 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AL807761.1-201ENST00000417622 171 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RPL21P109-201ENST00000422213 475 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC188H7C350 HIGD1AP4-201ENST00000430194 280 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 HSFY7P-201ENST00000432672 318 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 BTF3P10-201ENST00000433415 495 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RPS3AP54-201ENST00000435535 734 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 HSFY8P-201ENST00000437934 318 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC188H7C350 RPS4XP4-201ENST00000443195 763 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RPL21P133-201ENST00000443666 476 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 RPL29P29-201ENST00000448725 423 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RPS17P13-201ENST00000448974 407 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC098824.1-201ENST00000453565 980 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 HSFY5P-201ENST00000453726 309 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 MTND2P28-201ENST00000457540 1044 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 FTH1P2-201ENST00000466086 412 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AC016065.2-201ENST00000514530 444 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 RNU6-885P-201ENST00000516607 104 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC021451.1-201ENST00000523498 1129 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC188H7C350 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC188H7C350 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC188H7C350 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AC083899.3-201ENST00000603413 594 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC084824.4-201ENST00000620106 731 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC006065.5-201ENST00000623427 349 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 AC087821.2-201ENST00000637086 450 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC188H7C350 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC188H7C350 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC188H7C350 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC188H7C350 AL122126.1-201ENST00000546905 1318 ntBASIC4.13□□□□□ -1.75
CCDC188H7C350 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC188H7C350 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC188H7C350 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC188H7C350 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC188H7C350 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 RNU6-441P-201ENST00000384545 106 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 CYB5AP4-201ENST00000396692 399 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AL121978.1-201ENST00000402778 359 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 RSL24D1P1-201ENST00000404972 493 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AL133264.1-201ENST00000407157 562 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 RNU6-575P-201ENST00000411326 105 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 RHEBP3-201ENST00000411920 351 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 RPL26P29-201ENST00000415623 438 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC188H7C350 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC188H7C350 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 MTCYBP42-201ENST00000444653 1130 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC188H7C350 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC188H7C350 TPT1P13-201ENST00000449760 499 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 MRPL42P4-201ENST00000453267 443 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 MTCO3P16-201ENST00000454456 754 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 SNORD108-201ENST00000459332 71 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms