Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC115285.1-201ENST00000424879 736 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 OR5BE1P-201ENST00000425977 939 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC013262.1-201ENST00000426710 252 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 NANOGP6-201ENST00000429190 847 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 PPIAP17-201ENST00000438507 471 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 OR51B8P-201ENST00000449892 769 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 RN7SL585P-201ENST00000470538 280 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC091959.2-201ENST00000477363 321 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 SNX5P1-201ENST00000505757 1041 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 KRT19P6-201ENST00000510983 209 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 NPM1P41-201ENST00000512920 831 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 RNU6-488P-201ENST00000515918 99 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 RNU4-60P-201ENST00000517239 135 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC120057.2-201ENST00000571520 271 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC008687.2-201ENST00000597865 520 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AL451044.1-201ENST00000604867 238 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC103710.3-201ENST00000608157 948 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC008759.3-201ENST00000613300 508 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC093875.1-201ENST00000623688 504 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AP005264.7-201ENST00000625003 745 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 SNORA62.3-201ENST00000365110 153 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RNU6-932P-201ENST00000391108 106 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 DSTNP4-201ENST00000399472 474 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AL035405.1-201ENST00000400795 710 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RNU6-77P-201ENST00000410554 91 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AL691449.1-201ENST00000426570 421 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC000041.1-201ENST00000439655 175 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC006011.1-201ENST00000442758 349 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RPS4XP4-201ENST00000443195 763 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 Z77249.1-201ENST00000444622 1175 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 TVP23BP2-201ENST00000455082 615 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 CEACAMP4-201ENST00000457676 421 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RPL7P1-201ENST00000468161 747 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 RPL7P9-201ENST00000468715 747 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AP001086.1-201ENST00000494882 321 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AP003066.2-201ENST00000529375 555 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 CYP2C60P-201ENST00000566088 139 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC090666.1-201ENST00000578241 445 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC013468.1-201ENST00000608680 598 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AL392048.1-201ENST00000613946 534 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 MTND5P28-201ENST00000438005 1594 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 SAGE4P-201ENST00000442271 3381 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms