Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SDAD1P1-202ENST00000524156 2051 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MTND5P3-201ENST00000438536 1800 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL357515.1-201ENST00000402967 542 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL031577.2-201ENST00000404133 280 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 RNA5SP113-201ENST00000410486 84 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 TBCAP2-201ENST00000416175 326 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC019178.2-201ENST00000423595 505 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC000111.2-201ENST00000448200 210 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 ARPC3P2-201ENST00000457786 533 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC092045.1-201ENST00000495716 1231 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 RNA5SP249-201ENST00000516127 99 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 RNA5SP392-201ENST00000516905 112 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC137768.1-201ENST00000549998 553 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 UBE2FP2-201ENST00000566646 462 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC012435.1-202ENST00000568772 240 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 Z94722.1-201ENST00000604328 474 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010424.2-201ENST00000607594 443 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AL136295.6-201ENST00000610486 658 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC004009.2-201ENST00000623016 728 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC025574.1-201ENST00000554784 1653 ntBASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A3BPQ9Y5P4 AC025031.4-201ENST00000621248 3271 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009643.2-201ENST00000603543 1448 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 RNA5SP191-201ENST00000362585 102 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 U3.15-201ENST00000365398 212 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 Y_RNA.560-201ENST00000384689 102 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 VN1R8P-201ENST00000407739 893 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 UBE2D3P4-201ENST00000441973 436 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 EEF1E1P1-201ENST00000446998 430 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AURKAPS2-201ENST00000454983 333 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 OR5BM1P-201ENST00000512021 366 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC087276.1-201ENST00000529659 480 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL139174.1-201ENST00000531489 886 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms