Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC092474.3-201ENST00000603022 568 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC018618.2-201ENST00000604770 446 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 FAM91A3P-201ENST00000456826 2544 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC138393.1-206ENST00000540997 1886 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RN7SKP280-201ENST00000364196 304 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 MIR1193-201ENST00000408109 78 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-954P-201ENST00000411355 107 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 LINC01881-201ENST00000416103 412 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL121882.1-201ENST00000422893 417 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 PNRC2P1-201ENST00000423940 420 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 HMGB3P5-201ENST00000428894 612 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 SNORA71B-202ENST00000439232 272 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 CBX1P4-201ENST00000439415 457 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL049830.2-201ENST00000480072 201 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC023050.1-201ENST00000498198 304 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RAC1P2-201ENST00000511164 579 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP309-201ENST00000516670 106 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 SCARNA14-201ENST00000516903 136 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 IGKV2-23-201ENST00000518729 323 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC022695.1-201ENST00000522089 237 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 OR5AP1P-201ENST00000529730 940 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL121766.1-201ENST00000547436 487 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC025260.1-201ENST00000548858 430 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC084824.1-201ENST00000550917 1005 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL136520.1-202ENST00000555494 763 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 HSPE1P5-201ENST00000561489 272 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 BNIP3P5-201ENST00000562290 498 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC106785.3-201ENST00000564064 847 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC079148.1-201ENST00000565944 819 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC010680.4-201ENST00000605334 543 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 RPL21P136-201ENST00000605378 396 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC015726.3-201ENST00000624501 418 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 AC083865.1-201ENST00000636634 831 ntBASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAPPC4Q9Y296 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-609P-201ENST00000365459 107 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-317P-201ENST00000384031 107 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 MIR124-3-201ENST00000384866 87 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-328P-201ENST00000390887 106 ntBASIC3.38□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-796P-201ENST00000391086 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms