Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 RNU1-88P-201ENST00000459274 128 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC130509.1-201ENST00000464158 433 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC112206.3-201ENST00000514578 389 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 RNU6-1170P-201ENST00000515974 106 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 RNA5SP340-201ENST00000517132 107 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC022616.3-201ENST00000523940 148 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC096996.1-201ENST00000563813 325 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC093249.1-201ENST00000567049 203 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 LARP7P2-201ENST00000575306 125 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC008521.2-201ENST00000591021 259 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AL139099.4-201ENST00000614802 114 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 AC022106.2-201ENST00000620114 757 ntBASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.08□□□□□ -1.44
SALL4Q9UJQ4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 HSPA8P18-201ENST00000439846 1928 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 OR4G1P-203ENST00000641984 1631 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RNU4-1-201ENST00000363925 141 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RNA5SP510-201ENST00000364697 99 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RNU6-921P-201ENST00000384361 107 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RPL32P23-201ENST00000397237 405 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL591416.1-201ENST00000404015 867 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 PRELID3BP11-201ENST00000414230 479 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 SRIP2-201ENST00000428470 166 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 OR7E116P-201ENST00000448529 957 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC078785.3-201ENST00000476607 425 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RPL7AP10-201ENST00000481016 791 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 EIF4EP3-201ENST00000498782 656 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RN7SKP238-201ENST00000516483 249 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 ZNF705CP-201ENST00000530515 889 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 MIR3171-201ENST00000584270 74 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 NANOGP3-201ENST00000605855 286 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC093671.1-201ENST00000624981 2929 ntBASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SALL4Q9UJQ4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 RNA5SP500-201ENST00000364486 119 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 Y_RNA.255-201ENST00000364581 97 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 MIR559-201ENST00000385188 96 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 AL031985.1-201ENST00000392713 418 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 ARF4P3-201ENST00000397387 509 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 AC006548.1-201ENST00000427470 102 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 RPS15AP9-201ENST00000439856 381 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 HSPE1P28-201ENST00000443139 211 ntBASIC6.06□□□□□ -1.44
SALL4Q9UJQ4 AC073109.1-201ENST00000445066 978 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms