Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC093752.1-206ENST00000511823 336 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC010374.2-201ENST00000512933 535 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC005798.1-201ENST00000513715 387 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 HMGB1P19-201ENST00000517578 577 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC091163.3-201ENST00000518269 1144 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC021451.1-201ENST00000523498 1129 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC138701.1-201ENST00000524329 714 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 OR5M7P-201ENST00000526140 972 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC022882.1-201ENST00000532142 501 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC023575.1-201ENST00000580510 358 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MIR3939-201ENST00000582614 106 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 ARF4P1-201ENST00000605447 541 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 PART1_2.1-201ENST00000612397 250 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC084824.4-201ENST00000620106 731 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MIR6758-201ENST00000620653 63 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AL391262.2-201ENST00000622466 494 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 OR11H5P-202ENST00000641612 1325 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 OFD1P18Y-201ENST00000420889 959 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 OSTCP5-201ENST00000425293 453 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL356276.2-201ENST00000435919 558 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 USP9YP7-201ENST00000436723 430 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 RPL23AP46-201ENST00000438548 490 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 NUTF2P3-201ENST00000448540 384 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 USP9YP32-201ENST00000452432 430 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC026979.1-201ENST00000492525 396 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC017037.1-201ENST00000508460 471 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 RNU7-143P-201ENST00000516781 65 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AP001189.2-201ENST00000527320 189 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 SULT1C2P1-202ENST00000562418 459 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC079171.1-201ENST00000568788 914 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC090616.5-202ENST00000582111 297 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 IPO5P1-202ENST00000600039 287 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 IGHV3-29-201ENST00000604817 344 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC092953.2-201ENST00000608000 699 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 AP005264.7-201ENST00000625003 745 ntBASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.6□□□□□ -1.67
BLOC1S4Q9NUP1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SUGT1P1-201ENST00000379514 476 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 OR8G2P-201ENST00000412796 908 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 PGBD4P8-201ENST00000412993 562 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 MTCO3P1-205ENST00000422088 832 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RPS12P5-201ENST00000423449 371 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 VDAC1P6-201ENST00000430062 855 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RPS6P12-201ENST00000432491 726 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 USP9YP22-201ENST00000438971 294 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RPL36AP13-201ENST00000457490 317 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms