Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 DUSP12P1-201ENST00000612874 516 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC098657.3-201ENST00000620434 263 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 BX842559.1-201ENST00000419615 532 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 SKA2P1-201ENST00000425592 390 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 RPL4P2-201ENST00000447259 1282 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 RN7SL55P-201ENST00000464534 297 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 RN7SL12P-201ENST00000473849 290 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 RN7SL88P-201ENST00000480166 299 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC025164.1-201ENST00000496249 478 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC008967.1-201ENST00000504843 163 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 TBCAP3-201ENST00000512475 312 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 MIR3921-201ENST00000577308 85 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 MIR3137-201ENST00000577367 75 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC090415.1-201ENST00000581877 847 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 MIR4266-201ENST00000583300 55 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 HMGN2P28-201ENST00000606102 262 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 AC012510.1-201ENST00000607946 759 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 FAM157A-202ENST00000615155 405 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 PISRT1.1-201ENST00000616930 107 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 FLII-230ENST00000628188 156 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 HSPA8P4-201ENST00000511877 1920 ntBASIC8.19□□□□□ -1.1
RTN4Q9NQC3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
RTN4Q9NQC3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 RNA5SP333-201ENST00000363466 118 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 RNA5SP334-201ENST00000364825 118 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 SNORA33.2-201ENST00000365413 134 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 MIR654-201ENST00000385199 81 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 EI24P1-201ENST00000416584 867 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 PRPF38AP2-201ENST00000438179 851 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC231532.1-201ENST00000438584 312 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AL359672.1-201ENST00000442302 409 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 RN7SL395P-201ENST00000462960 291 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC026336.1-201ENST00000466577 351 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC100823.2-201ENST00000518337 699 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 RNU6-988P-201ENST00000519081 107 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms