Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 AC103881.1-201ENST00000603476 538 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 MIR6715A-201ENST00000615929 79 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 AL513302.2-201ENST00000562313 1842 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 RPS26P40-201ENST00000435209 294 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 AL357552.1-201ENST00000445254 415 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 AC106872.2-201ENST00000494303 480 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 SUMO2P4-201ENST00000504193 276 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 snoU109.6-201ENST00000516831 118 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 SNORD39.4-201ENST00000620099 78 ntBASIC4.87□□□□□ -1.63
SCAPERQ9BY12 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.87□□□□□ -1.63
SCAPERQ9BY12 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 OOSP1P1-201ENST00000423265 274 ntBASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC009263.1-201ENST00000441193 1239 ntBASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC008264.1-201ENST00000447612 367 ntBASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 H3F3AP1-201ENST00000559984 334 ntBASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 AC015849.2-201ENST00000605738 409 ntBASIC4.86□□□□□ -1.63
SCAPERQ9BY12 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCAPERQ9BY12 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 MIR423-201ENST00000362201 94 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 MTCO3P20-201ENST00000454926 688 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AL035404.1-201ENST00000497982 568 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC009812.2-201ENST00000517657 457 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AL121576.1-201ENST00000556055 276 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC015917.1-201ENST00000579654 510 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 MIR4644-201ENST00000579929 84 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC104984.5-201ENST00000586878 94 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC110741.2-201ENST00000605278 268 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AC245100.7-201ENST00000609678 442 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AP003485.2-201ENST00000623636 610 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 CR381670.1-201ENST00000624291 1693 ntBASIC4.85□□□□□ -1.63
SCAPERQ9BY12 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
SCAPERQ9BY12 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 AL135938.1-201ENST00000443141 297 ntBASIC4.84□□□□□ -1.63
SCAPERQ9BY12 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 AL157394.1-201ENST00000562983 1224 ntBASIC4.84□□□□□ -1.63
SCAPERQ9BY12 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 AL139286.1-201ENST00000604465 483 ntBASIC4.84□□□□□ -1.63
SCAPERQ9BY12 Z82195.1-201ENST00000604558 398 ntBASIC4.84□□□□□ -1.63
SCAPERQ9BY12 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.84□□□□□ -1.63
SCAPERQ9BY12 THAP12P8-201ENST00000447914 2115 ntBASIC4.84□□□□□ -1.64
SCAPERQ9BY12 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 RN7SKP220-201ENST00000410611 288 ntBASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AL139281.1-201ENST00000422120 335 ntBASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 RPL32P28-201ENST00000443577 397 ntBASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 RPS3AP50-201ENST00000487064 803 ntBASIC4.83□□□□□ -1.64
SCAPERQ9BY12 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AL049844.2-201ENST00000604280 628 ntBASIC4.83□□□□□ -1.64
SCAPERQ9BY12 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.83□□□□□ -1.64
SCAPERQ9BY12 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms