Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL136116.1-201ENST00000403591 381 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 RN7SKP220-201ENST00000410611 288 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 NANOGP6-201ENST00000429190 847 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 RPL21P112-201ENST00000434403 463 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC108938.1-201ENST00000451204 136 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 RPS4XP22-201ENST00000480755 780 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.18□□□□□ -1.74
ABCA3Q99758 Y_RNA.673-201ENST00000516306 88 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.18□□□□□ -1.74
ABCA3Q99758 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.18□□□□□ -1.74
ABCA3Q99758 RPL23AP92-201ENST00000603609 255 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC015813.4-201ENST00000610469 179 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.18□□□□□ -1.74
ABCA3Q99758 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AC090971.4-201ENST00000560291 1800 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AC112653.1-201ENST00000443851 386 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC016696.1-201ENST00000446949 318 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 ACTG1P13-201ENST00000486987 1043 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 YWHAEP4-201ENST00000505390 198 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 RNA5SP367-201ENST00000516557 118 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 RN7SKP116-201ENST00000516902 319 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC103783.1-201ENST00000520506 373 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.18□□□□□ -1.74
ABCA3Q99758 AL139174.1-201ENST00000531489 886 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 PRELID3BP8-201ENST00000604148 295 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC009948.4-201ENST00000604692 675 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 AC099506.2-201ENST00000623074 221 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 MIR622-201ENST00000638396 96 ntBASIC4.18□□□□□ -1.74
ABCA3Q99758 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
ABCA3Q99758 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ABCA3Q99758 AC138393.1-206ENST00000540997 1886 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ABCA3Q99758 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ABCA3Q99758 HMGN2P8-201ENST00000391458 268 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 RN7SKP56-201ENST00000410513 331 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 AL139413.1-201ENST00000421309 217 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 ETF1P3-201ENST00000430422 1160 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 YWHAEP5-201ENST00000431545 765 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 RPL7P36-201ENST00000444633 681 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.17□□□□□ -1.74
ABCA3Q99758 RPL23AP67-201ENST00000465341 474 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.17□□□□□ -1.74
ABCA3Q99758 GOLGA5P1-201ENST00000507317 980 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 HIGD1AP13-201ENST00000509878 289 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 HMGB1P19-201ENST00000517578 577 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 COX6CP8-201ENST00000522620 226 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.17□□□□□ -1.74
ABCA3Q99758 AL121576.1-201ENST00000556055 276 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 CYCSP41-201ENST00000616920 296 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.17□□□□□ -1.74
ABCA3Q99758 AC021755.1-201ENST00000559747 1447 ntBASIC4.17□□□□□ -1.74
ABCA3Q99758 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.17□□□□□ -1.74
ABCA3Q99758 AL121834.1-202ENST00000404494 277 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 RN7SKP247-201ENST00000411094 308 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 AL592148.1-201ENST00000413568 445 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 BTF3P9-201ENST00000418784 283 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.16□□□□□ -1.74
ABCA3Q99758 NPM1P13-201ENST00000452663 865 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 RPL5P16-201ENST00000471467 790 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
ABCA3Q99758 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.16□□□□□ -1.74
ABCA3Q99758 AL096803.3-201ENST00000609032 532 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 AC079298.2-201ENST00000623885 459 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.16□□□□□ -1.74
ABCA3Q99758 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
ABCA3Q99758 AC007336.1-201ENST00000576365 3828 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ABCA3Q99758 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
ABCA3Q99758 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ABCA3Q99758 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ABCA3Q99758 SCN1A-220ENST00000641603 12506 ntBASIC4.16□□□□□ -1.74
ABCA3Q99758 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ABCA3Q99758 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.74
ABCA3Q99758 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.15□□□□□ -1.74
ABCA3Q99758 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.15□□□□□ -1.74
ABCA3Q99758 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ABCA3Q99758 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
ABCA3Q99758 AL035404.1-201ENST00000497982 568 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.15□□□□□ -1.74
ABCA3Q99758 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.15□□□□□ -1.74
ABCA3Q99758 AC124856.1-201ENST00000600819 896 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 AC024153.1-201ENST00000603103 365 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 KPNA2P2-201ENST00000419546 1489 ntBASIC4.15□□□□□ -1.74
ABCA3Q99758 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ABCA3Q99758 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.15□□□□□ -1.74
ABCA3Q99758 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ABCA3Q99758 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ABCA3Q99758 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms