Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC015911.5-201ENST00000587076 451 ntBASIC3.79□□□□□ -1.8
CDK5RAP2Q96SN8 AP003122.5-201ENST00000527668 3766 ntBASIC3.79□□□□□ -1.8
CDK5RAP2Q96SN8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP2Q96SN8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP2Q96SN8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP2Q96SN8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 NEAT1-202ENST00000501122 22743 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 RN7SKP56-201ENST00000410513 331 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC110794.1-201ENST00000505816 425 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC069306.1-201ENST00000507006 843 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 RN7SKP116-201ENST00000516902 319 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 CR383656.14-201ENST00000551951 406 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 AC007336.1-201ENST00000576365 3828 ntBASIC3.78□□□□□ -1.8
CDK5RAP2Q96SN8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 AC104297.1-201ENST00000393779 870 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 HMGB3P18-201ENST00000406327 590 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 AC013470.3-201ENST00000420252 1194 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 IPMKP1-201ENST00000425988 855 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 DNAJC19P1-201ENST00000455312 319 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 RPL7P48-201ENST00000461513 746 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 PSMA2P1-201ENST00000526365 646 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 AL121603.1-201ENST00000553815 142 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 RNU4-47P-201ENST00000410876 114 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 RPL35AP12-201ENST00000425362 338 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 AC008481.1-201ENST00000463278 396 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 KCTD9P6-201ENST00000522306 950 ntBASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP2Q96SN8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC087312.1-201ENST00000471411 480 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC037198.2-201ENST00000478845 733 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 RPS4XP13-201ENST00000483219 789 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 RNA5SP217-201ENST00000515959 91 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 EIF4BP1-201ENST00000554881 351 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AP005205.1-201ENST00000563503 508 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC015871.2-201ENST00000603605 948 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC093732.2-201ENST00000607950 274 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC119674.1-212ENST00000641155 993 ntBASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP2Q96SN8 AC062016.1-201ENST00000355719 319 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 MIR3074-201ENST00000384885 81 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AL353678.1-201ENST00000422735 741 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 PDCL2P2-201ENST00000533651 189 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AC093010.3-201ENST00000570269 15214 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 SNORA44-201ENST00000384584 132 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 AC127526.1-201ENST00000417526 366 ntBASIC3.75□□□□□ -1.81
CDK5RAP2Q96SN8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms