Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AL121886.1-201ENST00000358609 435 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 SNORA70E-201ENST00000384492 135 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 MTCYBP4-201ENST00000401524 249 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC074085.1-201ENST00000413598 418 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC099677.1-201ENST00000420575 175 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC013403.1-201ENST00000436954 263 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AL162389.1-201ENST00000449233 177 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC116533.1-201ENST00000459748 321 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC010631.1-201ENST00000474150 156 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 VN1R105P-201ENST00000486595 910 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 IGBP1P4-201ENST00000503202 879 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 Y_RNA.718-201ENST00000517110 102 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 MIR4790-201ENST00000577799 79 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC006504.6-201ENST00000590142 199 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 BNIP3P25-201ENST00000596023 559 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 DUSP12P1-201ENST00000612874 516 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC040896.1-201ENST00000613819 479 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 MIR6070-201ENST00000613967 103 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC007546.1-201ENST00000619452 559 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 OR52H1-202ENST00000641796 1061 ntBASIC5.6□□□□□ -1.51
CITED4Q96RK1 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CITED4Q96RK1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CITED4Q96RK1 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CITED4Q96RK1 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CITED4Q96RK1 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CITED4Q96RK1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CITED4Q96RK1 SNORA4.3-201ENST00000365564 137 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 ARMCX7P-201ENST00000372828 562 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNU6-946P-201ENST00000383878 107 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNU6-701P-201ENST00000384059 107 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AL133260.1-201ENST00000405720 405 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 MRPL32P1-201ENST00000406301 247 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNU4-14P-201ENST00000410858 122 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNU6-387P-201ENST00000411331 105 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNA5SP111-201ENST00000411386 101 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 POLHP1-201ENST00000411806 470 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RPL37P10-201ENST00000412884 288 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC013429.1-201ENST00000456604 422 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC008620.1-201ENST00000468453 592 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC084878.1-201ENST00000480555 648 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC004453.1-201ENST00000487895 408 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RN7SL516P-201ENST00000496127 297 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 TRBVA-201ENST00000498804 316 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RN7SL284P-201ENST00000498823 275 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC106800.3-201ENST00000511389 308 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 MRPS5P3-201ENST00000515577 166 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 RNU6-1088P-201ENST00000516850 104 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 EEF1B2P2-201ENST00000519625 676 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 IGKV2-29-201ENST00000521304 372 ntBASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.59□□□□□ -1.51
CITED4Q96RK1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms