Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6-920P-201ENST00000410926 92 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 MTCYBP38-201ENST00000417160 1123 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC140479.3-201ENST00000418944 1126 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC092017.2-201ENST00000427600 362 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS3Q969F9 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC104651.2-201ENST00000447549 528 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC090142.1-201ENST00000465776 462 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC092757.1-201ENST00000467293 467 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 RPL36AP41-201ENST00000493820 306 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC110792.2-201ENST00000510278 224 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC026412.2-201ENST00000512270 1075 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS3Q969F9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 ZNF705CP-201ENST00000530515 889 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AL121766.1-201ENST00000547436 487 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AL110118.1-201ENST00000553543 400 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 AGGF1P8-201ENST00000562979 1000 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 MTCYBP28-201ENST00000566728 1132 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS3Q969F9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.15□□□□□ -1.59
HPS3Q969F9 COX6CP4-201ENST00000605798 228 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC007390.2-201ENST00000606229 3803 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC243773.3-201ENST00000613270 256 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AC079228.1-201ENST00000624774 1049 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AL592182.3-201ENST00000642132 3304 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HPS3Q969F9 AC117529.2-201ENST00000512159 2068 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 AP001273.1-201ENST00000624493 3152 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS3Q969F9 AL391684.1-202ENST00000641293 1636 ntBASIC5.15□□□□□ -1.59
HPS3Q969F9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
HPS3Q969F9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HPS3Q969F9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HPS3Q969F9 MTCO1P14-201ENST00000441695 1559 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 SNRPEP2-201ENST00000397592 279 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 CYCSP45-201ENST00000402289 315 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 NUP35P2-201ENST00000416748 943 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 ATG4AP1-201ENST00000416893 538 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 Z74021.1-201ENST00000423610 407 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AC073335.1-201ENST00000427776 363 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 GSTA7P-201ENST00000438425 448 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 VN1R10P-201ENST00000447106 875 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 PTMAP3-201ENST00000447474 330 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC092324.1-201ENST00000468671 324 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC006463.2-201ENST00000473326 348 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC005726.1-201ENST00000494679 427 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 RPS6P4-201ENST00000494693 758 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 MTCYBP17-201ENST00000503579 789 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AL389895.1-201ENST00000554127 252 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS3Q969F9 AF131215.7-201ENST00000602443 707 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC083899.3-201ENST00000603413 594 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 AC009704.2-201ENST00000618739 483 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.14□□□□□ -1.59
HPS3Q969F9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.14□□□□□ -1.59
HPS3Q969F9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.14□□□□□ -1.59
HPS3Q969F9 PCMTD1P7-201ENST00000634506 357 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 ASNSP1-201ENST00000518311 1939 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 LINC00561-201ENST00000565815 2738 ntBASIC5.14□□□□□ -1.59
HPS3Q969F9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
HPS3Q969F9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS3Q969F9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.13□□□□□ -1.59
HPS3Q969F9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.13□□□□□ -1.59
HPS3Q969F9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms