Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC111000.3-201ENST00000508057 576 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RNA5SP73-201ENST00000516744 108 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 HIGD1AP6-201ENST00000521833 279 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 MRPS36P5-201ENST00000551909 298 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 PCNAP1-202ENST00000595299 752 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC113403.1-201ENST00000604910 193 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 OR6R2P-201ENST00000609216 300 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 MIR378J-201ENST00000611988 109 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC107075.1-201ENST00000613695 314 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC004825.2-201ENST00000616634 455 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC009318.3-201ENST00000616916 503 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC120349.3-201ENST00000624377 529 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AL592148.3-201ENST00000608771 2646 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 DHX40P1-201ENST00000588725 1412 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 OR4K15-201ENST00000305051 1216 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RNU6-839P-201ENST00000363347 108 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 MIR217-201ENST00000384817 110 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AL049545.1-201ENST00000401856 572 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC092647.1-201ENST00000420654 287 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC011742.1-201ENST00000431448 434 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RPS6P12-201ENST00000432491 726 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 USP9YP22-201ENST00000438971 294 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 USP9YP25-201ENST00000457708 443 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 snoU13.1-201ENST00000459157 104 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 CEACAMP10-202ENST00000495431 496 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RNU5A-4P-201ENST00000516588 111 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RNA5SP135-201ENST00000517019 125 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 IGKV2-38-201ENST00000517443 247 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC009094.1-201ENST00000564443 426 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 VN1R78P-201ENST00000597393 564 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 MRPS35P3-201ENST00000603189 709 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC092954.1-201ENST00000609121 445 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AP000255.1-201ENST00000610276 676 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AC023158.2-201ENST00000614876 543 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 MIR6810-201ENST00000622701 70 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AL445363.3-201ENST00000623080 671 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 AP003485.2-201ENST00000623636 610 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 MTND2P41-201ENST00000637599 773 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 OR56B2P-202ENST00000641377 2453 ntBASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A1Q8WWI5 DBF4P1-201ENST00000412976 1892 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms