Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RN7SKP224-201ENST00000364140 325 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RPS3AP36-201ENST00000398190 775 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 MIR1182-201ENST00000408363 97 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 GJA6P-201ENST00000415117 1042 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL590139.1-201ENST00000416267 400 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 LINC02210-201ENST00000444561 288 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC009220.1-201ENST00000451614 275 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC104634.1-201ENST00000452720 462 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 snoU13.8-201ENST00000458890 104 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RPS4XP10-201ENST00000465034 731 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 LARP1BP2-201ENST00000486594 519 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC034222.1-201ENST00000494052 532 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC138853.1-201ENST00000503549 823 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 OR5BC1P-201ENST00000529327 739 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC022878.1-201ENST00000530684 149 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 OR4A43P-201ENST00000532938 908 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC027807.1-201ENST00000559921 996 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 ELOCP28-201ENST00000590044 317 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC009237.13-201ENST00000603193 276 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AC087283.1-201ENST00000604029 1074 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 MIR6810-201ENST00000622701 70 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 AL049780.3-201ENST00000624612 1583 ntBASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNPOQ8N3V7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC008758.3-201ENST00000507003 1829 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RNVU1-6-201ENST00000364688 164 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RNU6-297P-201ENST00000384636 107 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC013442.1-201ENST00000397347 228 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC016397.1-201ENST00000412463 242 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RPL31P2-201ENST00000413849 377 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 VTI1BP4-201ENST00000427516 527 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC091862.1-201ENST00000438016 1100 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 MTND6P18-201ENST00000439477 513 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AL357520.1-201ENST00000441557 453 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 FAM103A2P-201ENST00000444122 354 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RN7SL738P-201ENST00000470264 297 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 ACTR3P3-201ENST00000480448 893 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RPL7P24-201ENST00000493052 752 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 RPSAP51-201ENST00000497462 645 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 MTCO3P44-201ENST00000510977 541 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNPOQ8N3V7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms