Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 COX6CP18-201ENST00000448769 222 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC012671.1-201ENST00000451912 203 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RPS27AP17-201ENST00000463344 455 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RPS20P21-201ENST00000466859 343 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RN7SL691P-201ENST00000494487 301 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 PGBD4P4-201ENST00000509673 613 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RNU6-1225P-201ENST00000516336 65 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 Y_RNA.717-201ENST00000517106 92 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 MTCO2P15-201ENST00000532655 656 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC079587.1-201ENST00000603846 277 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC023158.2-201ENST00000614876 543 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 LINC01355-201ENST00000566551 5444 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 ZNF876P-202ENST00000398732 1485 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 MIR208A-201ENST00000362287 71 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 SNORD116.1-201ENST00000365628 92 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 FCF1P2-201ENST00000415284 583 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 HIGD1AP4-201ENST00000430194 280 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AL357520.1-201ENST00000441557 453 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 snoU13.7-201ENST00000459220 104 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC010301.1-201ENST00000473936 355 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC087879.1-201ENST00000474343 374 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC034244.1-201ENST00000507687 207 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 RNA5SP49-201ENST00000516450 115 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC026407.1-201ENST00000518369 204 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC005832.3-201ENST00000537929 631 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 NBEAP1-201ENST00000554452 979 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 MTCYBP28-201ENST00000566728 1132 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC091057.2-201ENST00000602594 792 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 GAS5-AS1-201ENST00000602767 694 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC009464.1-201ENST00000615731 469 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 MIR6891-201ENST00000618788 93 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 RNU6-156P-201ENST00000621869 107 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC067931.1-201ENST00000624190 671 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AF001550.2-201ENST00000636643 217 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 FAM157B-203ENST00000639350 358 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.77□□□□□ -1.65
HERC6Q8IVU3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERC6Q8IVU3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 RNA5SP387-201ENST00000364226 106 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ZNF603P-201ENST00000405613 487 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms