Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 Y_RNA.535-201ENST00000384612 99 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 RNU6-1009P-201ENST00000390996 107 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 CBX1P3-201ENST00000413296 527 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 OFD1P18Y-201ENST00000420889 959 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC007394.1-201ENST00000421941 531 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL389915.1-201ENST00000422463 466 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC233728.2-201ENST00000425348 757 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 FTLP19-201ENST00000433300 394 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 BTF3P10-201ENST00000433415 495 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 MTND4LP10-201ENST00000435146 291 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 CYCSP11-201ENST00000436426 315 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC073614.1-201ENST00000438690 650 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 DPPA3P1-201ENST00000448050 469 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 RPL7P31-201ENST00000450192 724 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 RN7SL329P-201ENST00000467740 299 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 MTCO1P35-201ENST00000515270 228 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 OR5AQ1P-201ENST00000527596 927 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL049839.1-201ENST00000556151 657 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC091489.2-201ENST00000566263 604 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 MIR4472-2-201ENST00000582069 67 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC020910.3-201ENST00000603701 874 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC107214.2-201ENST00000608204 634 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC011472.4-201ENST00000615848 491 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC037198.3-201ENST00000616754 526 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL158209.2-201ENST00000619266 216 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 AP003122.6-201ENST00000623831 495 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 CYP1D1P-201ENST00000416662 1433 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VRK3Q8IV63 CASC19-280ENST00000642102 1351 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 ZNF652P1-201ENST00000442420 1309 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 Y_RNA.509-201ENST00000384506 99 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 RNU6-1300P-201ENST00000391046 108 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 HMGB3P7-201ENST00000400214 611 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 MTCYBP36-201ENST00000404146 440 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 FCF1P10-201ENST00000407590 479 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 MIR1284-201ENST00000408337 120 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 SNORA11C-201ENST00000408532 129 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AIMP1P1-201ENST00000418670 937 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 LINC00993-201ENST00000420453 540 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 TIMM9P3-201ENST00000428659 274 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 RPL7P29-201ENST00000437151 728 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 PRPF38AP2-201ENST00000438179 851 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 PDSS1P2-201ENST00000449397 678 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 BX248409.1-201ENST00000455497 255 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 RN7SL517P-201ENST00000462240 305 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms