Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC008536.2-201ENST00000607284 349 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL121612.2-201ENST00000612261 482 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AL118522.2-201ENST00000616045 615 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 FRG1KP-201ENST00000623592 341 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 AC112243.1-201ENST00000623949 3851 ntBASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPAS4Q8IUM7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 OLMALINC-203ENST00000641087 3779 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 OR51AB1P-201ENST00000429046 620 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 KCTD9P3-201ENST00000434597 1169 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 MTCYBP45-201ENST00000435243 565 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC104850.1-201ENST00000435940 476 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AL049734.2-201ENST00000441066 616 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC007677.1-201ENST00000445757 515 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC132479.1-201ENST00000449160 144 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC072052.1-201ENST00000496556 306 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC023818.1-201ENST00000498379 384 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC010587.1-201ENST00000505809 469 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 PTP4A1P6-201ENST00000531034 478 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC090527.3-201ENST00000619041 548 ntBASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPAS4Q8IUM7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC005294.1-201ENST00000355509 281 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RNU6-1090P-201ENST00000364065 94 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RNU6-877P-201ENST00000383868 107 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SNORA20.2-201ENST00000383922 131 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SNORA68.2-201ENST00000391263 128 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 METTL15P3-201ENST00000415522 1221 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AL133482.1-201ENST00000415988 498 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 OR2B7P-201ENST00000429302 934 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 OR6D1P-201ENST00000436165 939 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RPL23AP20-201ENST00000447965 421 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 MTND1P18-201ENST00000448191 573 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RPL7L1P1-201ENST00000448259 785 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AL035090.1-201ENST00000454835 332 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC087385.1-201ENST00000475062 312 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RPL17P2-201ENST00000491913 451 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SNORD116-26-201ENST00000516006 96 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms