Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC112200.1-201ENST00000625015 234 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC139713.2-214ENST00000642059 1811 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 USP8P1-201ENST00000494673 3183 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 ZNF734P-201ENST00000419494 1534 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 OR5P1P-201ENST00000299512 925 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RNU1-130P-201ENST00000363930 160 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SNORA56-201ENST00000383966 129 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SNORD116-12-201ENST00000384468 92 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LAP3P1-201ENST00000403648 294 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 HSPE1P26-201ENST00000405341 275 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SNRPFP1-201ENST00000414761 252 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 MTND2P16-201ENST00000419987 799 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC233981.1-201ENST00000423224 461 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RAC1P8-201ENST00000427086 527 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 HIGD1AP12-201ENST00000427832 281 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC114495.1-201ENST00000441274 436 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RPL7P59-201ENST00000447700 943 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AL034418.1-201ENST00000448675 860 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC104306.1-201ENST00000449702 371 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 CEACAMP4-201ENST00000457676 421 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 SYPL1P1-201ENST00000473622 768 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC013356.1-201ENST00000489027 564 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC068305.1-201ENST00000497406 726 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC005798.1-201ENST00000513715 387 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RN7SKP116-201ENST00000516902 319 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC092747.2-201ENST00000545069 983 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 ZNF192P1-203ENST00000565888 810 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC074051.3-201ENST00000570238 358 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 MIR4284-201ENST00000578924 81 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC020910.2-201ENST00000603635 610 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC079587.1-201ENST00000603846 277 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC034229.4-201ENST00000607861 441 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AC106052.1-201ENST00000608029 497 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AP000255.1-201ENST00000610276 676 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 RMST_9.1-201ENST00000619945 193 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 MIR7154-201ENST00000620673 73 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 AL078595.3-201ENST00000623815 1166 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 ZNF663P-202ENST00000641770 1131 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 DBF4P1-201ENST00000412976 1892 ntBASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP54Q7Z3B4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 GABPAP-201ENST00000419271 1356 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 HMGB1P5-201ENST00000255320 642 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 RNU6-839P-201ENST00000363347 108 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 RNU6-707P-201ENST00000364647 95 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 SNORA11F-201ENST00000408237 128 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 FAR2P2-201ENST00000413041 594 ntBASIC4.06□□□□□ -1.76
NUP54Q7Z3B4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms