Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 MIR6826-201ENST00000617808 98 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC092650.2-201ENST00000619984 902 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC011477.1-204ENST00000623416 1325 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AL390862.1-201ENST00000635467 1469 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 MAPK10-304ENST00000641341 3984 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 INTS6P1-201ENST00000504674 2530 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHFQ7M4L6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC067945.1-201ENST00000342609 618 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 RHOT1P2-201ENST00000366423 333 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 RNU6-921P-201ENST00000384361 107 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL031577.2-201ENST00000404133 280 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 RN7SKP182-201ENST00000410772 298 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHFQ7M4L6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 SDCBPP2-201ENST00000424643 885 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 VDAC1P6-201ENST00000430062 855 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC023347.2-201ENST00000433994 462 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL353597.2-202ENST00000434901 373 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 THAP5P1-201ENST00000439089 262 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 MTND2P19-201ENST00000449129 1012 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 OR52J1P-201ENST00000450596 932 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 RPS26P28-201ENST00000470806 348 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AP000893.1-201ENST00000474462 794 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 OR4G11P-201ENST00000492842 939 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 SCARNA22-201ENST00000503991 125 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL389895.1-201ENST00000554127 252 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 RN7SL652P-201ENST00000577769 300 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC107982.3-201ENST00000584957 985 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC068790.5-201ENST00000602741 355 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL590229.1-201ENST00000603497 542 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC005191.1-201ENST00000603950 358 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC135507.1-201ENST00000607214 561 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC116651.1-201ENST00000609724 556 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AP000894.4-201ENST00000610185 483 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AL359535.1-201ENST00000612100 1087 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC091905.2-201ENST00000623143 306 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHFQ7M4L6 MTCO1P11-201ENST00000429111 1528 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 CR381670.1-201ENST00000624291 1693 ntBASIC4.1□□□□□ -1.75
SHFQ7M4L6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 MTND5P24-201ENST00000438892 1767 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 SNRPEP3-201ENST00000338402 276 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 RNU6-500P-201ENST00000362349 107 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 CYCSP45-201ENST00000402289 315 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 RNU2-28P-201ENST00000410457 189 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 RNU6-920P-201ENST00000410926 92 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 USP9YP33-201ENST00000412220 421 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 HSFY4P-201ENST00000415994 1181 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 RBMY2QP-201ENST00000429799 1147 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 NRBF2P3-201ENST00000432731 865 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AL590103.1-201ENST00000434488 307 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms