Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 DPPA3P2-201ENST00000553589 478 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC007956.1-201ENST00000555623 542 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 MIR3613-201ENST00000579844 87 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC063977.7-201ENST00000594454 337 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC039056.2-201ENST00000622261 511 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC073592.6-201ENST00000624271 415 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AL353662.3-201ENST00000625131 237 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC007938.1-201ENST00000562524 2902 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 AL391516.1-201ENST00000554380 2449 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC009831.5-201ENST00000624000 3189 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 RNU6-834P-201ENST00000362367 110 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 MIR1275-201ENST00000408770 80 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 FTH1P1-201ENST00000437933 532 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC087190.1-201ENST00000484462 480 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC107032.1-201ENST00000485945 480 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 FTH1P8-201ENST00000498161 514 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 RPS4XP20-201ENST00000505751 772 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 RNU6-1219P-201ENST00000516143 112 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 Y_RNA.687-201ENST00000516558 91 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC005519.1-201ENST00000554490 601 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 MT1CP-201ENST00000567054 174 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 CTSLP2-201ENST00000580501 394 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 SNORD39.3-201ENST00000584451 71 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC015982.1-201ENST00000608113 465 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC241584.2-201ENST00000637142 2090 ntBASIC7.24□□□□□ -1.25
VARS2Q5ST30 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VARS2Q5ST30 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
VARS2Q5ST30 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 HSPA8P14-201ENST00000552265 1805 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 OR52B3P-201ENST00000314715 928 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 RNA5SP85-201ENST00000365378 119 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 SNORA64.3-201ENST00000365647 134 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 Y_RNA.435-201ENST00000384095 112 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 U3.20-201ENST00000390909 217 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 RPL12P23-201ENST00000405880 490 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 CYCSP17-201ENST00000407870 315 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VARS2Q5ST30 RNU6-387P-201ENST00000411331 105 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 CYP4F32P-201ENST00000426492 504 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 RPL23AP19-201ENST00000436229 369 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 SNRPBP1-201ENST00000443634 282 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AP001324.2-201ENST00000461163 319 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 RPL37P6-202ENST00000464216 403 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC084198.1-201ENST00000477747 402 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 TRAPPC2P7-201ENST00000509650 231 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC008958.1-201ENST00000511047 682 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC106800.3-201ENST00000511389 308 ntBASIC7.23□□□□□ -1.25
VARS2Q5ST30 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.23□□□□□ -1.25
VARS2Q5ST30 AC090751.1-201ENST00000566966 267 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms