Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL159169.3-201ENST00000608871 561 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AL450489.1-201ENST00000612071 468 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC007490.1-201ENST00000624321 703 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 RNA5SP502-201ENST00000362694 119 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC107081.1-201ENST00000414975 361 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 COX6B1P1-201ENST00000415962 213 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 NANOGP6-201ENST00000429190 847 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 CETN4P-201ENST00000432407 469 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 TPT1P13-201ENST00000449760 499 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 VN1R40P-201ENST00000455196 941 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC146507.1-201ENST00000468335 354 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL136126.1-201ENST00000473603 402 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC108022.1-201ENST00000493466 478 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC021146.8-201ENST00000507455 733 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 RNU6-583P-201ENST00000516012 92 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AP001880.2-201ENST00000538233 448 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC090888.2-201ENST00000559765 1144 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL512347.1-201ENST00000566420 503 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC025946.2-201ENST00000603398 234 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL031281.1-201ENST00000604049 488 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL139286.1-201ENST00000604465 483 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC024940.4-201ENST00000605507 246 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL136295.6-201ENST00000610486 658 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 AL442639.1-201ENST00000625030 1899 ntBASIC4.76□□□□□ -1.65
CCDC38Q502W7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC38Q502W7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC38Q502W7 NMD3P1-201ENST00000439704 1488 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC38Q502W7 RN7SKP103-201ENST00000363848 320 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 SNRPEP2-201ENST00000397592 279 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 RSL24D1P4-201ENST00000400938 484 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AL109941.1-201ENST00000401925 229 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 RPS12P23-201ENST00000419579 400 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 NIPA2P1-201ENST00000426223 976 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 RPL39P6-201ENST00000448289 150 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC063943.1-201ENST00000465434 453 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC002456.2-201ENST00000509356 380 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 PPBPP1-201ENST00000510807 373 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 RNA5SP446-201ENST00000515955 82 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC009117.1-201ENST00000563948 554 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 RPL7P50-201ENST00000600588 727 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AL031320.1-201ENST00000604177 357 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC006270.3-201ENST00000605967 1036 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC245297.2-201ENST00000610119 565 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 Mico1.1-201ENST00000611698 204 ntBASIC4.75□□□□□ -1.65
CCDC38Q502W7 AC103858.2-201ENST00000621471 543 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms