Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK3Q00526 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDK3Q00526 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 DBF4P1-201ENST00000412976 1892 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC105074.1-201ENST00000623380 3095 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 AC116667.1-201ENST00000604855 2072 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 OR11H4-201ENST00000315409 1082 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 RNU6-413P-201ENST00000384115 107 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 ENSAP1-201ENST00000392855 326 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 MTCO3P31-201ENST00000405526 789 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 VN1R8P-201ENST00000407739 893 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 RNU2-21P-201ENST00000410368 188 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC004987.3-201ENST00000413879 771 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC007435.1-201ENST00000421086 415 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 GTF2IP23-201ENST00000423746 351 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 AL356276.2-201ENST00000435919 558 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 HMGN3P1-201ENST00000453847 193 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC005008.1-201ENST00000456151 612 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 SNORD11.1-201ENST00000459482 85 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 RN7SKP82-201ENST00000516786 223 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 MIR4504-201ENST00000577413 92 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.11□□□□□ -1.75
CDK3Q00526 RNU4-89P-201ENST00000607443 133 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AC024257.5-201ENST00000612739 531 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
CDK3Q00526 RNA5SP196-201ENST00000625967 102 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 AF001550.2-201ENST00000636643 217 ntBASIC4.11□□□□□ -1.75
CDK3Q00526 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDK3Q00526 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDK3Q00526 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDK3Q00526 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK3Q00526 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK3Q00526 AC091046.3-201ENST00000631455 1574 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CDK3Q00526 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
CDK3Q00526 ERCC6-202ENST00000374127 1782 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK3Q00526 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK3Q00526 RNU6-1066P-201ENST00000363573 105 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 RNU6-1300P-201ENST00000391046 108 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 RPS24P12-201ENST00000402084 394 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 HDGFP1-201ENST00000405943 252 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK3Q00526 AL136133.1-201ENST00000413694 376 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 USP9YP22-201ENST00000438971 294 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 AL357520.1-201ENST00000441557 453 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 RPL7P31-201ENST00000450192 724 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC079804.1-201ENST00000461922 436 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 RPL7AP28-201ENST00000464513 571 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 AL672167.3-201ENST00000465951 960 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 HMGB1P21-201ENST00000502313 581 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK3Q00526 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK3Q00526 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK3Q00526 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
CDK3Q00526 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms