Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC005191.1-201ENST00000603950 358 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC090525.3-201ENST00000605601 189 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AL049539.1-201ENST00000611964 459 ntBASIC3.14□□□□□ -1.91
VBP1P61758 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 MIR3653-201ENST00000625572 110 ntBASIC3.14□□□□□ -1.91
VBP1P61758 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.14□□□□□ -1.91
VBP1P61758 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
VBP1P61758 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VBP1P61758 CIR1P2-201ENST00000514821 1342 ntBASIC3.14□□□□□ -1.91
VBP1P61758 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VBP1P61758 CCT8P1-201ENST00000413611 1657 ntBASIC3.14□□□□□ -1.91
VBP1P61758 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VBP1P61758 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VBP1P61758 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 AC079741.1-201ENST00000321498 212 ntBASIC3.13□□□□□ -1.91
VBP1P61758 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VBP1P61758 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 RPS3AP26-201ENST00000398259 784 ntBASIC3.13□□□□□ -1.91
VBP1P61758 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AL390879.2-203ENST00000426943 1121 ntBASIC3.13□□□□□ -1.91
VBP1P61758 BX276092.4-201ENST00000452056 248 ntBASIC3.13□□□□□ -1.91
VBP1P61758 Z95152.1-201ENST00000453556 656 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC007967.1-201ENST00000455422 1159 ntBASIC3.13□□□□□ -1.91
VBP1P61758 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
VBP1P61758 AC110792.1-201ENST00000491826 472 ntBASIC3.13□□□□□ -1.91
VBP1P61758 SETP14-201ENST00000497538 873 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
VBP1P61758 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.13□□□□□ -1.91
VBP1P61758 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
VBP1P61758 AC090888.3-201ENST00000558917 509 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.13□□□□□ -1.91
VBP1P61758 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
VBP1P61758 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.13□□□□□ -1.91
VBP1P61758 BDH2P1-201ENST00000602288 736 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC073387.2-201ENST00000604797 784 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC016769.4-201ENST00000616893 535 ntBASIC3.13□□□□□ -1.91
VBP1P61758 AC091953.3-201ENST00000623220 236 ntBASIC3.13□□□□□ -1.91
VBP1P61758 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.13□□□□□ -1.91
VBP1P61758 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VBP1P61758 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VBP1P61758 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VBP1P61758 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VBP1P61758 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
VBP1P61758 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
VBP1P61758 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
VBP1P61758 RNA5SP129-201ENST00000410276 118 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC109780.2-201ENST00000413467 845 ntBASIC3.12□□□□□ -1.91
VBP1P61758 NUP35P2-201ENST00000416748 943 ntBASIC3.12□□□□□ -1.91
VBP1P61758 GTF3AP1-201ENST00000416942 1004 ntBASIC3.12□□□□□ -1.91
VBP1P61758 RPS15AP40-201ENST00000419621 391 ntBASIC3.12□□□□□ -1.91
VBP1P61758 COX6CP15-201ENST00000426313 211 ntBASIC3.12□□□□□ -1.91
VBP1P61758 DNAJC19P7-201ENST00000428811 344 ntBASIC3.12□□□□□ -1.91
VBP1P61758 USP9YP9-201ENST00000429406 715 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 VN1R54P-201ENST00000435210 1049 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.12□□□□□ -1.91
VBP1P61758 YWHAZP7-201ENST00000436906 631 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 MED6P1-201ENST00000439659 713 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 NUTF2P3-201ENST00000448540 384 ntBASIC3.12□□□□□ -1.91
VBP1P61758 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 TPT1P13-201ENST00000449760 499 ntBASIC3.12□□□□□ -1.91
VBP1P61758 CYCSP53-201ENST00000455540 265 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.12□□□□□ -1.91
VBP1P61758 snoU13.1-201ENST00000459157 104 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC096992.1-201ENST00000459808 709 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC013356.1-201ENST00000489027 564 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC025674.1-201ENST00000507074 324 ntBASIC3.12□□□□□ -1.91
VBP1P61758 KLHL2P1-201ENST00000508691 521 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 ACTR6P1-201ENST00000514311 1104 ntBASIC3.12□□□□□ -1.91
VBP1P61758 HIGD1AP18-201ENST00000520730 278 ntBASIC3.12□□□□□ -1.91
VBP1P61758 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.12□□□□□ -1.91
VBP1P61758 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VBP1P61758 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.12□□□□□ -1.91
VBP1P61758 BNIP3P5-201ENST00000562290 498 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.12□□□□□ -1.91
VBP1P61758 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 MIR4715-201ENST00000584117 79 ntBASIC3.12□□□□□ -1.91
VBP1P61758 SNORD84-203ENST00000584275 78 ntBASIC3.12□□□□□ -1.91
VBP1P61758 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.12□□□□□ -1.91
VBP1P61758 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
VBP1P61758 AC114781.5-201ENST00000615297 108 ntBASIC3.12□□□□□ -1.91
VBP1P61758 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.12□□□□□ -1.91
VBP1P61758 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VBP1P61758 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.12□□□□□ -1.91
VBP1P61758 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.12□□□□□ -1.91
VBP1P61758 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
VBP1P61758 AL136520.1-201ENST00000600311 1322 ntBASIC3.12□□□□□ -1.91
VBP1P61758 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms