Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AC067852.7-201ENST00000623270 535 ntBASIC3.96□□□□□ -1.78
CDH11P55287 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH11P55287 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH11P55287 AC025031.4-201ENST00000621248 3271 ntBASIC3.96□□□□□ -1.78
CDH11P55287 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 AC009229.4-201ENST00000623854 1947 ntBASIC3.95□□□□□ -1.78
CDH11P55287 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
CDH11P55287 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 AC026951.1-201ENST00000559530 2459 ntBASIC3.95□□□□□ -1.78
CDH11P55287 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.95□□□□□ -1.78
CDH11P55287 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
CDH11P55287 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 Y_RNA.408-201ENST00000383987 102 ntBASIC3.95□□□□□ -1.78
CDH11P55287 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 RSL24D1P4-201ENST00000400938 484 ntBASIC3.95□□□□□ -1.78
CDH11P55287 MTND4P22-201ENST00000413116 1169 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 LUZP4P1-201ENST00000415420 344 ntBASIC3.95□□□□□ -1.78
CDH11P55287 HIGD1AP4-201ENST00000430194 280 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 USP9YP22-201ENST00000438971 294 ntBASIC3.95□□□□□ -1.78
CDH11P55287 UBE2V1P3-201ENST00000439651 417 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC093155.1-201ENST00000440164 826 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH11P55287 RPL23AP43-201ENST00000446445 471 ntBASIC3.95□□□□□ -1.78
CDH11P55287 EEF1A1P1-201ENST00000447052 739 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 RFC5P1-201ENST00000454419 874 ntBASIC3.95□□□□□ -1.78
CDH11P55287 RPL21P126-201ENST00000470049 478 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC068587.1-201ENST00000483613 781 ntBASIC3.95□□□□□ -1.78
CDH11P55287 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.95□□□□□ -1.78
CDH11P55287 PRELID3BP7-201ENST00000503606 469 ntBASIC3.95□□□□□ -1.78
CDH11P55287 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 BOLA3P3-201ENST00000505182 232 ntBASIC3.95□□□□□ -1.78
CDH11P55287 RN7SKP31-201ENST00000516354 278 ntBASIC3.95□□□□□ -1.78
CDH11P55287 RNU6-885P-201ENST00000516607 104 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 PARP1P2-201ENST00000556806 195 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH11P55287 AC023575.1-201ENST00000580510 358 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 AC008751.2-201ENST00000597885 980 ntBASIC3.95□□□□□ -1.78
CDH11P55287 NIFKP6-201ENST00000598115 845 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AL139395.1-201ENST00000603662 160 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC005191.1-201ENST00000603950 358 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AL390816.3-201ENST00000604527 1066 ntBASIC3.95□□□□□ -1.78
CDH11P55287 MIR432-201ENST00000606207 94 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH11P55287 AC078899.5-201ENST00000612475 178 ntBASIC3.95□□□□□ -1.78
CDH11P55287 AC006065.6-201ENST00000625201 545 ntBASIC3.95□□□□□ -1.78
CDH11P55287 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH11P55287 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH11P55287 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH11P55287 AL451142.2-201ENST00000429076 2090 ntBASIC3.94□□□□□ -1.78
CDH11P55287 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 RNU6-582P-201ENST00000362989 107 ntBASIC3.94□□□□□ -1.78
CDH11P55287 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 FABP12P1-201ENST00000401911 322 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 PRRC2CP1-201ENST00000404428 159 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AL139098.1-201ENST00000407291 389 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RNA5SP80-201ENST00000410475 111 ntBASIC3.94□□□□□ -1.78
CDH11P55287 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPL7AP25-201ENST00000423357 805 ntBASIC3.94□□□□□ -1.78
CDH11P55287 CHIAP3-201ENST00000423668 1133 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPL37P1-201ENST00000432310 284 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPS6P12-201ENST00000432491 726 ntBASIC3.94□□□□□ -1.78
CDH11P55287 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 789.8 ms