Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCNKAP51800 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC104454.1-201ENST00000421341 1401 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCNKAP51800 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CLCNKAP51800 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.73
CLCNKAP51800 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
CLCNKAP51800 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLCNKAP51800 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCNKAP51800 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCNKAP51800 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 HMGB1P5-201ENST00000255320 642 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 Y_RNA.169-201ENST00000363745 96 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCNKAP51800 SNORD65.1-201ENST00000390889 71 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 AC007435.1-201ENST00000421086 415 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCNKAP51800 AL031736.2-201ENST00000426573 787 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 MTND5P25-201ENST00000430499 799 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC091390.1-201ENST00000433904 331 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AL008629.1-201ENST00000438615 184 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 RPL23AP52-201ENST00000439311 478 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 HMGB1P48-201ENST00000446155 598 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCNKAP51800 FGF7P3-201ENST00000454645 303 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 RPL35AP15-201ENST00000468042 339 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC010618.1-201ENST00000469924 477 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC109327.1-201ENST00000471666 403 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 RPL35P6-201ENST00000490024 372 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 AC010486.2-201ENST00000505572 483 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 PDCL2P2-201ENST00000533651 189 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC007834.2-201ENST00000536310 343 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC010198.2-201ENST00000550612 259 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCNKAP51800 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCNKAP51800 AL442163.2-201ENST00000553912 710 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.27□□□□□ -1.73
CLCNKAP51800 KPNA2P3-201ENST00000584190 848 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 AL590392.1-201ENST00000604960 446 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLCNKAP51800 AC009039.2-201ENST00000624524 529 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 AC055839.1-201ENST00000634467 498 ntBASIC4.27□□□□□ -1.73
CLCNKAP51800 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLCNKAP51800 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCNKAP51800 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCNKAP51800 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCNKAP51800 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 RNU1-20P-201ENST00000363314 162 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 RN7SKP44-201ENST00000363602 316 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC097374.1-203ENST00000400783 485 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 RPL23AP26-201ENST00000412728 464 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 CEACAMP8-201ENST00000413902 580 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 RPEP2-201ENST00000432149 701 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC069285.2-201ENST00000440210 275 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCNKAP51800 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 ART2BP-201ENST00000453501 499 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCNKAP51800 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCNKAP51800 RN7SL691P-201ENST00000494487 301 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCNKAP51800 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.26□□□□□ -1.73
CLCNKAP51800 RNA5SP73-201ENST00000516744 108 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms