Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BRCA2P51587 IFNNP1-201ENST00000429219 553 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 RPL7L1P1-201ENST00000448259 785 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 RNU6-548P-201ENST00000517083 115 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BRCA2P51587 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.31□□□□□ -1.88
BRCA2P51587 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.31□□□□□ -1.88
BRCA2P51587 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.31□□□□□ -1.88
BRCA2P51587 AC112492.1-201ENST00000449607 712 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
BRCA2P51587 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.31□□□□□ -1.88
BRCA2P51587 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.31□□□□□ -1.88
BRCA2P51587 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 MTCO1P39-201ENST00000426148 480 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
BRCA2P51587 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.3□□□□□ -1.88
BRCA2P51587 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCA2P51587 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 ZNF658B-202ENST00000615961 3375 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 RNU6-482P-201ENST00000391068 107 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 RPL7P8-201ENST00000411964 730 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 RPL36AP21-201ENST00000490372 323 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
BRCA2P51587 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
BRCA2P51587 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCA2P51587 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
BRCA2P51587 ELF2P3-201ENST00000445099 1506 ntBASIC3.3□□□□□ -1.88
BRCA2P51587 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BRCA2P51587 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 RNA5SP99-201ENST00000364020 114 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 EIF4EP1-201ENST00000422311 642 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
BRCA2P51587 AC015871.2-201ENST00000603605 948 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 MIR6817-201ENST00000615588 66 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCA2P51587 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AL009174.1-201ENST00000426577 416 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 RPL9P32-201ENST00000464118 620 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 METTL15P1-201ENST00000481421 1045 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 AP001004.1-201ENST00000582468 324 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AC009977.1-201ENST00000586015 570 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
BRCA2P51587 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
BRCA2P51587 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 SKP1P1-201ENST00000438081 489 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCA2P51587 OR5AP1P-201ENST00000529730 940 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCA2P51587 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCA2P51587 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.29□□□□□ -1.88
BRCA2P51587 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCA2P51587 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCA2P51587 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 RNU6-859P-201ENST00000362728 107 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 U8.2-201ENST00000363156 134 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 RNA5SP68-201ENST00000363885 119 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 AC099560.2-201ENST00000457554 255 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 NPM1P28-201ENST00000492269 840 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.28□□□□□ -1.88
BRCA2P51587 AC016727.1-205ENST00000605437 569 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
BRCA2P51587 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.28□□□□□ -1.88
BRCA2P51587 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 AC105402.1-201ENST00000413336 545 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 MORF4L2P1-201ENST00000503761 858 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCA2P51587 AP000859.1-201ENST00000525536 307 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 AC106785.3-201ENST00000564064 847 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 OR7A8P-201ENST00000595427 913 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 uc_338.1-201ENST00000612113 180 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
BRCA2P51587 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms