Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 BNIP3P10-201ENST00000605360 577 ntBASIC5.53□□□□□ -1.52
SMARCA4P51532 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.53□□□□□ -1.52
SMARCA4P51532 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SMARCA4P51532 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.53□□□□□ -1.52
SMARCA4P51532 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 MIR22-201ENST00000362190 85 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 BX276092.4-201ENST00000452056 248 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 AC126389.1-201ENST00000477436 290 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 RPS4XP22-201ENST00000480755 780 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.52□□□□□ -1.53
SMARCA4P51532 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA4P51532 CYCSP39-201ENST00000565821 309 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.52□□□□□ -1.53
SMARCA4P51532 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SMARCA4P51532 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC019097.1-201ENST00000424783 735 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC010307.1-201ENST00000467206 836 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA4P51532 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.52□□□□□ -1.53
SMARCA4P51532 RFPL4AP5-201ENST00000514977 504 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.52□□□□□ -1.53
SMARCA4P51532 AC018552.3-201ENST00000567416 561 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 ELOCP29-201ENST00000588193 334 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 uc_338.1-201ENST00000612113 180 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 AC079298.2-201ENST00000623885 459 ntBASIC5.52□□□□□ -1.53
SMARCA4P51532 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SMARCA4P51532 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA4P51532 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA4P51532 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 RN7SKP56-201ENST00000410513 331 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 RPL6P21-201ENST00000418672 846 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA4P51532 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA4P51532 AC034159.1-201ENST00000513885 583 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 AC103783.1-201ENST00000520506 373 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SMARCA4P51532 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA4P51532 AC079600.2-201ENST00000550076 130 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 AC011270.1-201ENST00000558606 583 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 MIR4738-201ENST00000579134 87 ntBASIC5.51□□□□□ -1.53
SMARCA4P51532 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SMARCA4P51532 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.5□□□□□ -1.53
SMARCA4P51532 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA4P51532 RPS12P18-201ENST00000442381 270 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.5□□□□□ -1.53
SMARCA4P51532 COX6CP8-201ENST00000522620 226 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.5□□□□□ -1.53
SMARCA4P51532 CYP2C60P-201ENST00000566088 139 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 AC024153.1-201ENST00000603103 365 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 AC068722.2-201ENST00000618734 544 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 AC103858.2-201ENST00000621471 543 ntBASIC5.5□□□□□ -1.53
SMARCA4P51532 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA4P51532 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA4P51532 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA4P51532 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA4P51532 OR1S2-201ENST00000302592 978 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.49□□□□□ -1.53
SMARCA4P51532 AL139413.1-201ENST00000421309 217 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.49□□□□□ -1.53
SMARCA4P51532 MRPS31P2-201ENST00000451581 518 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 AC128713.1-201ENST00000471495 306 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA4P51532 OR1AB1P-201ENST00000585564 761 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 RPL23AP92-201ENST00000603609 255 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.49□□□□□ -1.53
SMARCA4P51532 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SMARCA4P51532 AC138393.1-206ENST00000540997 1886 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMARCA4P51532 AC087190.4-201ENST00000574616 8334 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 AC104446.1-201ENST00000613728 1321 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 AL132656.3-201ENST00000606384 1595 ntBASIC5.49□□□□□ -1.53
SMARCA4P51532 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SMARCA4P51532 OR56A5-201ENST00000340110 738 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 AL353692.2-201ENST00000407054 335 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 RPL21P112-201ENST00000434403 463 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 CST9LP2-201ENST00000437612 320 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 MTND2P25-201ENST00000449028 610 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.48□□□□□ -1.53
SMARCA4P51532 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMARCA4P51532 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMARCA4P51532 AC091544.4-201ENST00000555268 342 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 MIR4727-201ENST00000622232 55 ntBASIC5.48□□□□□ -1.53
SMARCA4P51532 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMARCA4P51532 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms