Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AL121576.1-201ENST00000556055 276 ntBASIC5.7□□□□□ -1.5
SMARCA2P51531 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCA2P51531 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCA2P51531 AC000123.3-201ENST00000624029 4975 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 RNA5SP184-201ENST00000411071 108 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 YWHAEP5-201ENST00000431545 765 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 RPL21P112-201ENST00000434403 463 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.69□□□□□ -1.5
SMARCA2P51531 RN7SL93P-201ENST00000463035 293 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.69□□□□□ -1.5
SMARCA2P51531 AL451049.1-201ENST00000608672 497 ntBASIC5.69□□□□□ -1.5
SMARCA2P51531 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SMARCA2P51531 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMARCA2P51531 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMARCA2P51531 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.68□□□□□ -1.5
SMARCA2P51531 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.68□□□□□ -1.5
SMARCA2P51531 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.68□□□□□ -1.5
SMARCA2P51531 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.68□□□□□ -1.5
SMARCA2P51531 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.68□□□□□ -1.5
SMARCA2P51531 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.68□□□□□ -1.5
SMARCA2P51531 AL512310.1-201ENST00000548639 172 ntBASIC5.68□□□□□ -1.5
SMARCA2P51531 VN1R90P-201ENST00000595717 726 ntBASIC5.68□□□□□ -1.5
SMARCA2P51531 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMARCA2P51531 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SMARCA2P51531 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMARCA2P51531 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMARCA2P51531 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SMARCA2P51531 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SMARCA2P51531 RPS4XP13-201ENST00000483219 789 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 SCARNA20.6-201ENST00000517251 106 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCA2P51531 AC015917.1-201ENST00000579654 510 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 MIR4435-1-201ENST00000582552 80 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.67□□□□□ -1.5
SMARCA2P51531 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCA2P51531 AC021755.1-201ENST00000559747 1447 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AC017007.4-201ENST00000503353 1352 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 NCAPGP1-201ENST00000505112 1814 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 SNORA71.1-201ENST00000364523 117 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 BTF3P9-201ENST00000418784 283 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.67□□□□□ -1.5
SMARCA2P51531 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SMARCA2P51531 RN7SKP132-201ENST00000516001 208 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 RNU1-41P-201ENST00000516161 162 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 RNU1-48P-201ENST00000516400 162 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCA2P51531 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.67□□□□□ -1.5
SMARCA2P51531 AC106785.3-201ENST00000564064 847 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 OR1AB1P-201ENST00000585564 761 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AL096803.3-201ENST00000609032 532 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AC231759.1-201ENST00000616455 597 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 AC010149.2-201ENST00000637608 315 ntBASIC5.67□□□□□ -1.5
SMARCA2P51531 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCA2P51531 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.67□□□□□ -1.5
SMARCA2P51531 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCA2P51531 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
SMARCA2P51531 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SMARCA2P51531 AC126124.2-201ENST00000413542 321 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 NPM1P11-201ENST00000417106 855 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 MTND2P11-201ENST00000423638 648 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCA2P51531 RPL7L1P1-201ENST00000448259 785 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 AL513124.1-201ENST00000450410 614 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 AL109933.2-201ENST00000452651 260 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 RPL23AP67-201ENST00000465341 474 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCA2P51531 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.66□□□□□ -1.5
SMARCA2P51531 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.66□□□□□ -1.5
SMARCA2P51531 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCA2P51531 CR381670.1-201ENST00000624291 1693 ntBASIC5.66□□□□□ -1.5
SMARCA2P51531 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCA2P51531 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SMARCA2P51531 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCA2P51531 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCA2P51531 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCA2P51531 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.65□□□□□ -1.5
SMARCA2P51531 SKP1P1-201ENST00000438081 489 ntBASIC5.65□□□□□ -1.5
SMARCA2P51531 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCA2P51531 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.65□□□□□ -1.5
SMARCA2P51531 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCA2P51531 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCA2P51531 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.65□□□□□ -1.5
SMARCA2P51531 BNIP3P38-201ENST00000601117 544 ntBASIC5.65□□□□□ -1.5
SMARCA2P51531 AC009948.4-201ENST00000604692 675 ntBASIC5.65□□□□□ -1.5
SMARCA2P51531 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCA2P51531 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMARCA2P51531 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.65□□□□□ -1.51
SMARCA2P51531 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.64□□□□□ -1.51
SMARCA2P51531 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.64□□□□□ -1.51
SMARCA2P51531 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SMARCA2P51531 RPS4XP8-201ENST00000402039 771 ntBASIC5.64□□□□□ -1.51
SMARCA2P51531 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.64□□□□□ -1.51
SMARCA2P51531 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.64□□□□□ -1.51
SMARCA2P51531 RN7SKP116-201ENST00000516902 319 ntBASIC5.64□□□□□ -1.51
SMARCA2P51531 CYCSP41-201ENST00000616920 296 ntBASIC5.64□□□□□ -1.51
SMARCA2P51531 MIR4727-201ENST00000622232 55 ntBASIC5.64□□□□□ -1.51
SMARCA2P51531 AC099506.2-201ENST00000623074 221 ntBASIC5.64□□□□□ -1.51
SMARCA2P51531 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
SMARCA2P51531 AC000403.1-201ENST00000613696 3585 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms