Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 AC007012.2-201ENST00000623206 1676 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF144AP50876 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF144AP50876 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RNF144AP50876 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
RNF144AP50876 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 Y_RNA.39-201ENST00000362620 98 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 SNORA38B-201ENST00000363524 131 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 RN7SKP118-201ENST00000364331 330 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC092634.1-201ENST00000366505 199 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 UBBP1-201ENST00000392399 473 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 LDHAP5-201ENST00000394996 622 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 RNU4-46P-201ENST00000410818 138 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 RN7SKP296-201ENST00000411185 341 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 HMGN1P24-201ENST00000412282 298 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 RPL7P46-201ENST00000425129 740 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC092651.1-201ENST00000426110 312 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 SNRPBP1-201ENST00000443634 282 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 RAC1P7-201ENST00000445367 377 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF144AP50876 SNORA58-201ENST00000505219 137 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC104806.1-201ENST00000508720 308 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC016559.2-201ENST00000510759 359 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 RNU4-77P-201ENST00000516692 156 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF144AP50876 CYCSP22-201ENST00000517555 339 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 IGHV3-76-201ENST00000522465 295 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC100784.1-201ENST00000522790 310 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 IGLV3-6-201ENST00000523937 250 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF144AP50876 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF144AP50876 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF144AP50876 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF144AP50876 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF144AP50876 AC020910.3-201ENST00000603701 874 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC116165.3-201ENST00000614524 400 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AL049794.2-201ENST00000616301 365 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AC055839.1-201ENST00000634467 498 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 AL606534.2-204ENST00000635008 178 ntBASIC6.09□□□□□ -1.43
RNF144AP50876 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF144AP50876 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF144AP50876 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF144AP50876 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RNF144AP50876 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF144AP50876 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF144AP50876 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.09□□□□□ -1.44
RNF144AP50876 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RNF144AP50876 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.09□□□□□ -1.44
RNF144AP50876 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF144AP50876 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
RNF144AP50876 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF144AP50876 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF144AP50876 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF144AP50876 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF144AP50876 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF144AP50876 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF144AP50876 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF144AP50876 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF144AP50876 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF144AP50876 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RNF144AP50876 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
RNF144AP50876 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RNF144AP50876 RNA5SP382-201ENST00000363355 112 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF144AP50876 U3.52-201ENST00000384034 216 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 Y_RNA.477-201ENST00000384352 108 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 Y_RNA.576-201ENST00000384781 102 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF144AP50876 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF144AP50876 DPPA2P2-201ENST00000418220 897 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 PTPN2P1-201ENST00000423212 1072 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 RPL36P19-201ENST00000430744 301 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF144AP50876 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF144AP50876 HMGB3P21-201ENST00000452483 547 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF144AP50876 SCARNA18-201ENST00000459004 134 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.08□□□□□ -1.44
RNF144AP50876 RPS3AP41-201ENST00000462701 778 ntBASIC6.08□□□□□ -1.44
RNF144AP50876 RPL23AP64-201ENST00000469465 435 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms