Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 MFSD13B-201ENST00000420133 1290 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AL353748.1-201ENST00000440753 474 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 MTCO3P2-201ENST00000457365 171 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 RPL7P49-201ENST00000471402 708 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 PAICSP4-201ENST00000517543 1253 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 TRMT10BP1-201ENST00000519377 943 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 ZNF705CP-201ENST00000530515 889 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 HIGD1AP17-201ENST00000554576 276 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AC087477.6-201ENST00000559595 843 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 SULT1C2P1-202ENST00000562418 459 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC008751.2-201ENST00000597885 980 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM4SF4P48230 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TM4SF4P48230 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 AL445487.1-201ENST00000415694 1580 ntBASIC5.06□□□□□ -1.6
TM4SF4P48230 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM4SF4P48230 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TM4SF4P48230 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM4SF4P48230 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TM4SF4P48230 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM4SF4P48230 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM4SF4P48230 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TM4SF4P48230 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 ELL2P4-201ENST00000446870 1376 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM4SF4P48230 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 SNORA73.2-201ENST00000364946 201 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 RNU6-157P-201ENST00000383957 107 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 MTND4P13-201ENST00000402078 1023 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC062016.2-201ENST00000420950 676 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 SDCBPP2-201ENST00000424643 885 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 RPL23AP16-201ENST00000441715 421 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.05□□□□□ -1.6
TM4SF4P48230 RPL12P26-201ENST00000452430 487 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 VN1R40P-201ENST00000455196 941 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 NCOR1P1-202ENST00000486162 291 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 ACTG1P13-201ENST00000486987 1043 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 RNF138P1-201ENST00000502765 546 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 RNA5SP497-201ENST00000516081 97 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AP000926.4-201ENST00000527351 454 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 OR4A12P-201ENST00000530847 918 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 SLC2A13P1-201ENST00000531560 322 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC107982.3-201ENST00000584957 985 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC007179.3-201ENST00000604976 235 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AC091946.2-201ENST00000606105 291 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AL159169.3-201ENST00000608871 561 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 AC131159.1-201ENST00000621854 213 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.05□□□□□ -1.6
TM4SF4P48230 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 GVINP1-202ENST00000531871 7271 ntBASIC5.05□□□□□ -1.6
TM4SF4P48230 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
TM4SF4P48230 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM4SF4P48230 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.04□□□□□ -1.6
TM4SF4P48230 RNU6-984P-201ENST00000363236 109 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM4SF4P48230 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms