Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC104964.3-201ENST00000606115 2860 ntBASIC5.61□□□□□ -1.51
CCNFP41002 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.61□□□□□ -1.51
CCNFP41002 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 U3.7-201ENST00000363668 216 ntBASIC5.61□□□□□ -1.51
CCNFP41002 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 Y_RNA.481-201ENST00000384373 102 ntBASIC5.61□□□□□ -1.51
CCNFP41002 RPL31P1-201ENST00000398116 372 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AL049693.1-201ENST00000402760 611 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 GNG5P5-201ENST00000420444 220 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AL353193.1-201ENST00000421444 268 ntBASIC5.61□□□□□ -1.51
CCNFP41002 RIMKLBP2-201ENST00000424737 654 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC113412.1-201ENST00000425840 504 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC096632.1-201ENST00000427395 310 ntBASIC5.61□□□□□ -1.51
CCNFP41002 BX323845.3-201ENST00000428215 527 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 AL389925.1-201ENST00000432257 728 ntBASIC5.61□□□□□ -1.51
CCNFP41002 RPL23AP74-201ENST00000437246 471 ntBASIC5.61□□□□□ -1.51
CCNFP41002 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 AL118496.2-201ENST00000448300 230 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC239809.1-201ENST00000450470 217 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AL445665.1-202ENST00000452436 324 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 RN7SL188P-201ENST00000469842 285 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC104563.1-201ENST00000476147 376 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC034222.1-201ENST00000494052 532 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNFP41002 AC018797.3-201ENST00000513388 1241 ntBASIC5.61□□□□□ -1.51
CCNFP41002 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 AP003034.1-201ENST00000534621 422 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNFP41002 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 AC068993.1-201ENST00000546724 589 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNFP41002 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.61□□□□□ -1.51
CCNFP41002 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 BNIP3P10-201ENST00000605360 577 ntBASIC5.61□□□□□ -1.51
CCNFP41002 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 AP003122.6-201ENST00000623831 495 ntBASIC5.61□□□□□ -1.51
CCNFP41002 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNFP41002 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNFP41002 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCNFP41002 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNFP41002 AC092125.1-201ENST00000562568 1995 ntBASIC5.6□□□□□ -1.51
CCNFP41002 ERCC6-202ENST00000374127 1782 ntBASIC5.6□□□□□ -1.51
CCNFP41002 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNFP41002 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCNFP41002 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 MTND4P23-201ENST00000447723 1363 ntBASIC5.6□□□□□ -1.51
CCNFP41002 OR52B3P-201ENST00000314715 928 ntBASIC5.6□□□□□ -1.51
CCNFP41002 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.6□□□□□ -1.51
CCNFP41002 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCNFP41002 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 Y_RNA.86-201ENST00000363020 111 ntBASIC5.6□□□□□ -1.51
CCNFP41002 RNU6-343P-201ENST00000364709 104 ntBASIC5.6□□□□□ -1.51
CCNFP41002 RNA5SP30-201ENST00000365552 115 ntBASIC5.6□□□□□ -1.51
CCNFP41002 RNU6-456P-201ENST00000384493 107 ntBASIC5.6□□□□□ -1.51
CCNFP41002 snosnR66.1-201ENST00000391095 99 ntBASIC5.6□□□□□ -1.51
CCNFP41002 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNFP41002 MTND3P17-201ENST00000416968 344 ntBASIC5.6□□□□□ -1.51
CCNFP41002 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNFP41002 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 AC019097.1-201ENST00000424783 735 ntBASIC5.6□□□□□ -1.51
CCNFP41002 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNFP41002 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNFP41002 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNFP41002 HSPE1P28-201ENST00000443139 211 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AL596266.1-201ENST00000448132 400 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC005297.2-201ENST00000450430 606 ntBASIC5.6□□□□□ -1.51
CCNFP41002 RPS29P25-201ENST00000481709 171 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNFP41002 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNFP41002 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNFP41002 IGLV3-24-201ENST00000517477 197 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
CCNFP41002 HSPA8P13-201ENST00000523715 472 ntBASIC5.6□□□□□ -1.51
CCNFP41002 AC022832.1-201ENST00000530718 645 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms