Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
VCANP13611 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.17□□□□□ -1.9
VCANP13611 AC108729.3-201ENST00000513484 108 ntBASIC3.17□□□□□ -1.9
VCANP13611 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
VCANP13611 MIR6817-201ENST00000615588 66 ntBASIC3.17□□□□□ -1.9
VCANP13611 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 AC092079.1-201ENST00000558620 1985 ntBASIC3.17□□□□□ -1.9
VCANP13611 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VCANP13611 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC3.17□□□□□ -1.9
VCANP13611 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VCANP13611 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 RNU6-851P-201ENST00000384565 107 ntBASIC3.17□□□□□ -1.9
VCANP13611 ATF1P1-201ENST00000406040 927 ntBASIC3.17□□□□□ -1.9
VCANP13611 NPM1P28-201ENST00000492269 840 ntBASIC3.17□□□□□ -1.9
VCANP13611 RN7SKP209-201ENST00000516888 304 ntBASIC3.17□□□□□ -1.9
VCANP13611 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.17□□□□□ -1.9
VCANP13611 AL353997.5-201ENST00000618886 171 ntBASIC3.17□□□□□ -1.9
VCANP13611 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VCANP13611 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
VCANP13611 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VCANP13611 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
VCANP13611 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.16□□□□□ -1.9
VCANP13611 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
VCANP13611 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.16□□□□□ -1.9
VCANP13611 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.16□□□□□ -1.9
VCANP13611 UBTFL9-201ENST00000534504 1148 ntBASIC3.16□□□□□ -1.9
VCANP13611 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.16□□□□□ -1.9
VCANP13611 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.16□□□□□ -1.9
VCANP13611 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.16□□□□□ -1.9
VCANP13611 AP000942.3-201ENST00000603702 160 ntBASIC3.16□□□□□ -1.9
VCANP13611 AL732372.2-225ENST00000642124 456 ntBASIC3.16□□□□□ -1.9
VCANP13611 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.16□□□□□ -1.9
VCANP13611 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
VCANP13611 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.16□□□□□ -1.9
VCANP13611 AC004552.1-201ENST00000419089 348 ntBASIC3.16□□□□□ -1.9
VCANP13611 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
VCANP13611 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.16□□□□□ -1.9
VCANP13611 RPL23AP11-201ENST00000475260 469 ntBASIC3.16□□□□□ -1.9
VCANP13611 AC114967.1-201ENST00000504890 259 ntBASIC3.16□□□□□ -1.9
VCANP13611 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.16□□□□□ -1.9
VCANP13611 MIR4781-201ENST00000585250 76 ntBASIC3.16□□□□□ -1.9
VCANP13611 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.16□□□□□ -1.9
VCANP13611 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VCANP13611 MORF4L2P1-201ENST00000503761 858 ntBASIC3.15□□□□□ -1.9
VCANP13611 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.9
VCANP13611 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VCANP13611 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VCANP13611 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VCANP13611 OR5BR1P-201ENST00000524992 1330 ntBASIC3.15□□□□□ -1.9
VCANP13611 Y_RNA.116-201ENST00000363292 103 ntBASIC3.15□□□□□ -1.91
VCANP13611 RN7SKP223-201ENST00000410582 62 ntBASIC3.15□□□□□ -1.91
VCANP13611 AL592148.1-201ENST00000413568 445 ntBASIC3.15□□□□□ -1.91
VCANP13611 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.15□□□□□ -1.91
VCANP13611 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.15□□□□□ -1.91
VCANP13611 AC069540.1-201ENST00000446320 988 ntBASIC3.15□□□□□ -1.91
VCANP13611 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.15□□□□□ -1.91
VCANP13611 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
VCANP13611 MRPS21P9-201ENST00000571150 257 ntBASIC3.15□□□□□ -1.91
VCANP13611 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.15□□□□□ -1.91
VCANP13611 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VCANP13611 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VCANP13611 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
VCANP13611 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
VCANP13611 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.15□□□□□ -1.91
VCANP13611 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.15□□□□□ -1.91
VCANP13611 MTCO1P51-201ENST00000427672 1060 ntBASIC3.15□□□□□ -1.91
VCANP13611 FTLP19-201ENST00000433300 394 ntBASIC3.15□□□□□ -1.91
VCANP13611 RPL7L1P1-201ENST00000448259 785 ntBASIC3.15□□□□□ -1.91
VCANP13611 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.15□□□□□ -1.91
VCANP13611 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
VCANP13611 AP001646.1-201ENST00000527936 915 ntBASIC3.15□□□□□ -1.91
VCANP13611 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
VCANP13611 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VCANP13611 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC3.15□□□□□ -1.91
VCANP13611 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.15□□□□□ -1.91
VCANP13611 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.15□□□□□ -1.91
VCANP13611 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.14□□□□□ -1.91
VCANP13611 AC113430.1-201ENST00000506872 718 ntBASIC3.14□□□□□ -1.91
VCANP13611 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.14□□□□□ -1.91
VCANP13611 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCANP13611 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms