Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC093853.1-201ENST00000515689 483 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RNU6-579P-201ENST00000516879 102 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 HSPE1P5-201ENST00000561489 272 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 ABI1P1-201ENST00000603375 1120 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 KATNBL1P5-201ENST00000605015 517 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 uc_338.32-201ENST00000615087 172 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AL732618.1-201ENST00000623251 301 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC020978.9-201ENST00000624380 1141 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 MIR6715B-201ENST00000637172 77 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MTND4P31-201ENST00000425607 1343 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 RN7SKP280-201ENST00000364196 304 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 RPL32P23-201ENST00000397237 405 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AL590290.1-201ENST00000405336 380 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 USP9YP19-201ENST00000412165 485 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC068533.1-201ENST00000418542 415 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 PNRC2P1-201ENST00000423940 420 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 OR4F13P-201ENST00000428478 931 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 PTP4A1P3-201ENST00000433661 420 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 BX679664.1-201ENST00000434429 253 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MTND4P15-201ENST00000437913 1033 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 RPS27P5-201ENST00000444247 244 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 RPL12P26-201ENST00000452430 487 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC022034.3-201ENST00000471393 478 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 TRBV8-2-201ENST00000475637 270 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MTATP6P22-201ENST00000507369 598 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC133963.2-201ENST00000513686 578 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MTND4LP31-201ENST00000514859 294 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 FABP5P12-201ENST00000515543 389 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 HMGB1P23-201ENST00000518743 568 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC087272.1-201ENST00000523624 533 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC087499.8-201ENST00000578406 226 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC107982.3-201ENST00000584957 985 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 ZNF92P2-201ENST00000600543 1059 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AP001033.2-201ENST00000609701 1003 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC090912.3-201ENST00000609775 533 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC005344.1-201ENST00000613391 459 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AC022149.2-201ENST00000621061 203 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 MFSD8-236ENST00000641509 4050 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 AP004289.2-201ENST00000444413 1457 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.22□□□□□ -1.89
HLA-DPB1P04440 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DPB1P04440 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DPB1P04440 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms