Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 RPS23P10-201ENST00000416185 486 ntBASIC4.23□□□□□ -1.73
LDLRP01130 OR4K6P-201ENST00000416478 897 ntBASIC4.23□□□□□ -1.73
LDLRP01130 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 BX119904.4-201ENST00000424402 301 ntBASIC4.23□□□□□ -1.73
LDLRP01130 ELOCP18-201ENST00000434209 337 ntBASIC4.23□□□□□ -1.73
LDLRP01130 NANOGP2-201ENST00000435391 727 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 EEF1A1P39-201ENST00000440791 250 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC004865.1-201ENST00000442276 1003 ntBASIC4.23□□□□□ -1.73
LDLRP01130 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 AL589880.1-201ENST00000448271 287 ntBASIC4.23□□□□□ -1.73
LDLRP01130 NUTF2P3-201ENST00000448540 384 ntBASIC4.23□□□□□ -1.73
LDLRP01130 RSL24D1P3-201ENST00000449255 495 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC112492.1-201ENST00000449607 712 ntBASIC4.23□□□□□ -1.73
LDLRP01130 VN1R32P-201ENST00000452234 905 ntBASIC4.23□□□□□ -1.73
LDLRP01130 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 MRPL42P4-201ENST00000453267 443 ntBASIC4.23□□□□□ -1.73
LDLRP01130 DDX39BP2-208ENST00000453923 258 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC005410.1-202ENST00000460347 485 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC079804.1-201ENST00000461922 436 ntBASIC4.23□□□□□ -1.73
LDLRP01130 RN7SL303P-201ENST00000469773 251 ntBASIC4.23□□□□□ -1.73
LDLRP01130 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 PRELID3BP7-201ENST00000503606 469 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC091435.1-201ENST00000505442 584 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 AC008494.2-201ENST00000514544 370 ntBASIC4.23□□□□□ -1.73
LDLRP01130 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 AP003033.1-201ENST00000527244 415 ntBASIC4.23□□□□□ -1.73
LDLRP01130 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 AC007834.2-201ENST00000536310 343 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.23□□□□□ -1.73
LDLRP01130 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRP01130 AC015688.2-201ENST00000584523 262 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 AL020997.3-201ENST00000602843 359 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC090181.2-201ENST00000602975 672 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC115286.1-201ENST00000604298 434 ntBASIC4.23□□□□□ -1.73
LDLRP01130 ARF4P1-201ENST00000605447 541 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LDLRP01130 AC109454.4-201ENST00000623411 649 ntBASIC4.23□□□□□ -1.73
LDLRP01130 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRP01130 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
LDLRP01130 AC092162.3-201ENST00000624511 1624 ntBASIC4.23□□□□□ -1.73
LDLRP01130 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 MTND4P8-201ENST00000514997 1362 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC025263.3-201ENST00000622965 1396 ntBASIC4.23□□□□□ -1.73
LDLRP01130 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 AC139769.1-204ENST00000472297 1931 ntBASIC4.23□□□□□ -1.73
LDLRP01130 AC134882.1-201ENST00000603738 1676 ntBASIC4.22□□□□□ -1.73
LDLRP01130 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LDLRP01130 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.22□□□□□ -1.73
LDLRP01130 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDLRP01130 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDLRP01130 AL121657.1-201ENST00000327215 531 ntBASIC4.22□□□□□ -1.73
LDLRP01130 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.22□□□□□ -1.73
LDLRP01130 RPL17P50-201ENST00000396131 546 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AL049545.1-201ENST00000401856 572 ntBASIC4.22□□□□□ -1.73
LDLRP01130 Z98745.1-201ENST00000402553 494 ntBASIC4.22□□□□□ -1.73
LDLRP01130 SFR1P1-201ENST00000403720 688 ntBASIC4.22□□□□□ -1.73
LDLRP01130 GSTA8P-201ENST00000404253 637 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AL136310.1-201ENST00000404926 654 ntBASIC4.22□□□□□ -1.73
LDLRP01130 RPL31P52-201ENST00000407532 367 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 AC104306.1-201ENST00000449702 371 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 RPL7P19-201ENST00000469948 618 ntBASIC4.22□□□□□ -1.73
LDLRP01130 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 AP002812.1-201ENST00000495378 474 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC084024.2-201ENST00000503480 791 ntBASIC4.22□□□□□ -1.73
LDLRP01130 HNRNPKP5-201ENST00000515300 253 ntBASIC4.22□□□□□ -1.73
LDLRP01130 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
LDLRP01130 Y_RNA.688-201ENST00000516565 95 ntBASIC4.22□□□□□ -1.73
LDLRP01130 MRPL49P2-201ENST00000521066 465 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms