Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXA2O43364 IGLV3-6-201ENST00000523937 250 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXA2O43364 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.89□□□□□ -1.31
HOXA2O43364 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXA2O43364 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXA2O43364 MIR6128-201ENST00000615528 109 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AC103705.1-201ENST00000619013 241 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AC024884.1-201ENST00000620583 399 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AL445363.3-201ENST00000623080 671 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AC067931.1-201ENST00000624190 671 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXA2O43364 AC055839.1-201ENST00000634467 498 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AL732372.2-225ENST00000642124 456 ntBASIC6.89□□□□□ -1.31
HOXA2O43364 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXA2O43364 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXA2O43364 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HOXA2O43364 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
HOXA2O43364 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXA2O43364 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 AC011455.2-201ENST00000599320 3336 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 RNA5SP350-201ENST00000363298 111 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 RNU1-115P-201ENST00000365329 160 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 Y_RNA.428-201ENST00000384078 102 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 SNORA51.9-201ENST00000384295 124 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 Y_RNA.496-201ENST00000384444 101 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HOXA2O43364 Y_RNA.645-201ENST00000391229 102 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 RNU2-64P-201ENST00000411315 191 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 HMGN1P20-201ENST00000411849 300 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 RPS29P14-201ENST00000431518 171 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXA2O43364 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXA2O43364 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.88□□□□□ -1.31
HOXA2O43364 AL162388.1-201ENST00000450912 352 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXA2O43364 AC023194.2-201ENST00000465398 406 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC093767.1-201ENST00000504523 156 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC093853.1-201ENST00000515689 483 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 RNU6-699P-201ENST00000517081 110 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 RN7SKP35-201ENST00000517210 151 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXA2O43364 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.88□□□□□ -1.31
HOXA2O43364 AC007375.1-201ENST00000554513 578 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC013244.1-201ENST00000604279 193 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AL355816.1-201ENST00000607951 118 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC009229.3-201ENST00000608056 282 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXA2O43364 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
HOXA2O43364 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 AL592148.3-201ENST00000608771 2646 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 AC130650.2-201ENST00000618736 2403 ntBASIC6.88□□□□□ -1.31
HOXA2O43364 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXA2O43364 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
HOXA2O43364 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXA2O43364 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXA2O43364 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HOXA2O43364 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXA2O43364 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms