Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC093663.2-201ENST00000484625 313 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC092045.1-201ENST00000495716 1231 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC027338.1-201ENST00000514840 825 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC112198.4-201ENST00000515450 351 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RNU6-334P-201ENST00000517072 102 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC007991.1-201ENST00000522680 631 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC084824.1-201ENST00000550917 1005 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 CR383656.14-201ENST00000551951 406 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AL391262.2-201ENST00000622466 494 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 RPL23AP61-201ENST00000623642 466 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC080188.3-201ENST00000624842 748 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 FRG1DP-201ENST00000635586 771 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 AC017002.4-201ENST00000604721 1525 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
TRIM49D1C9J1S8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL136964.1-201ENST00000622038 2990 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL513302.2-201ENST00000562313 1842 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL592494.2-201ENST00000425455 1548 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 SNORA63.3-201ENST00000362682 132 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 RNU6-650P-201ENST00000365658 111 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 SNORD65-201ENST00000391079 73 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL034374.1-201ENST00000406329 351 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 RNA5SP239-201ENST00000410218 129 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 RPS12P23-201ENST00000419579 400 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL513174.1-201ENST00000423182 629 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AP000907.1-201ENST00000428428 510 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 HMGB1P5-202ENST00000451497 985 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 VN1R105P-201ENST00000486595 910 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC107398.1-201ENST00000486904 505 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC068305.1-201ENST00000497406 726 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC020593.1-201ENST00000507399 299 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC108471.1-201ENST00000513977 287 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC087888.1-201ENST00000550884 1254 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC090330.1-201ENST00000588646 764 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 MIR1264-201ENST00000616374 69 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AP003355.3-201ENST00000623465 114 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC112200.1-201ENST00000625015 234 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 AC007529.1-201ENST00000418574 2178 ntBASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49D1C9J1S8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AL136520.1-201ENST00000600311 1322 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 OR4A15-201ENST00000314706 1035 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 FRG1CP-201ENST00000358464 769 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 Y_RNA.126-201ENST00000363382 111 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 MIR92A2-201ENST00000385299 75 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 SNORA57.1-201ENST00000391227 145 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RPL32P23-201ENST00000397237 405 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 RPL26P37-201ENST00000411983 438 ntBASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49D1C9J1S8 FO393414.1-201ENST00000428697 1184 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms