Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 PPIAP15-201ENST00000479662 484 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 RPS3AP6-201ENST00000484430 795 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 NCOR1P1-202ENST00000486162 291 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC008494.2-201ENST00000514544 370 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC104115.2-201ENST00000523026 687 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 SERPINE4P-201ENST00000554978 281 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC090616.5-202ENST00000582111 297 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC090312.2-201ENST00000582687 378 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 RNU6-156P-201ENST00000621869 107 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 ZNF285B-201ENST00000561698 1767 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 RNA5SP119-201ENST00000362715 117 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 RNU6-761P-201ENST00000384148 107 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 U8.11-201ENST00000384699 133 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 U8.12-201ENST00000384701 133 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 PGBD4P8-201ENST00000412993 562 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 Z97055.1-201ENST00000419730 712 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AL356535.1-201ENST00000440335 398 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 RSL24D1P2-201ENST00000445584 366 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 NANOGP10-201ENST00000453325 895 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 CFTRP1-201ENST00000456646 183 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 U8.18-201ENST00000459285 133 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 SNORA48.9-201ENST00000516419 162 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 NDUFA5P2-201ENST00000519723 344 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 HAUS1P3-201ENST00000523909 662 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 YPEL5P3-201ENST00000547227 352 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AC245128.3-201ENST00000594721 748 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 U73479.1-201ENST00000618062 168 ntBASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TM9SF3Q9HD45 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 MTND4P10-201ENST00000446199 1363 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC009501.3-201ENST00000605001 1352 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC000367.1-201ENST00000452711 1766 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 SNORA3.3-201ENST00000408712 125 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 USP12PY-201ENST00000427677 1064 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC091286.1-201ENST00000431233 461 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 RPL7P49-201ENST00000471402 708 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AC078785.3-201ENST00000476607 425 ntBASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.92□□□□□ -1.78
TM9SF3Q9HD45 RPL31P13-201ENST00000484151 370 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms