Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 NDUFA5P2-201ENST00000519723 344 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 TRAV37-201ENST00000553906 342 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 AL031985.2-201ENST00000600955 480 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 GMCL1P2-201ENST00000605230 823 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM4Q9C037 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 MTND5P27-201ENST00000428871 1720 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 MIR1251-201ENST00000408552 70 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC115115.1-201ENST00000449927 248 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 RPS27P29-201ENST00000463110 252 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 Vault.1-201ENST00000516474 102 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC090877.1-201ENST00000561418 344 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC234775.3-201ENST00000564612 656 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 MIR4458-201ENST00000578872 75 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AL713998.2-201ENST00000604538 1198 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC092354.2-201ENST00000607786 514 ntBASIC3.7□□□□□ -1.82
TRIM4Q9C037 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM4Q9C037 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM4Q9C037 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AP004289.2-201ENST00000444413 1457 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AP002001.2-201ENST00000529025 1469 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AL035423.1-201ENST00000420331 213 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 CYCSP20-201ENST00000473154 315 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 HSPD1P15-201ENST00000505573 1122 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 HIGD1AP18-201ENST00000520730 278 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC011602.1-201ENST00000546484 331 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC091516.1-201ENST00000549191 703 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 ABI1P1-201ENST00000603375 1120 ntBASIC3.69□□□□□ -1.82
TRIM4Q9C037 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM4Q9C037 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM4Q9C037 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM4Q9C037 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 RPL7AP73-201ENST00000413490 353 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AL159987.2-201ENST00000432754 307 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AL138799.3-201ENST00000438968 350 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 RPL5P24-201ENST00000463742 885 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 TXNP6-201ENST00000510190 310 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms