Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC090312.1-201ENST00000580637 348 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC006557.5-201ENST00000603126 811 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC092447.9-201ENST00000603395 144 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 CR381572.1-201ENST00000625098 102 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC005225.5-201ENST00000623547 2225 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 AC092111.1-201ENST00000618256 3358 ntBASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 AL049555.1-201ENST00000562834 1933 ntBASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL25A1Q9BXS0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RNA5SP319-201ENST00000362768 119 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RN7SKP113-201ENST00000363891 295 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RNU1-85P-201ENST00000364127 164 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.367-201ENST00000365544 101 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.376-201ENST00000365638 108 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.378-201ENST00000365652 113 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.428-201ENST00000384078 102 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RNU1-149P-201ENST00000390870 161 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 MIR1193-201ENST00000408109 78 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC093162.1-201ENST00000419682 124 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 TXNP5-201ENST00000441043 315 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RPS27AP15-201ENST00000447672 466 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC092647.2-201ENST00000452998 253 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC096922.1-201ENST00000461635 651 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 RNU7-51P-201ENST00000516560 62 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 IGKV2-23-201ENST00000518729 323 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 HMGB1P42-201ENST00000532126 553 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 SAA3P-201ENST00000533267 365 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC068993.1-201ENST00000546724 589 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC023043.2-201ENST00000589678 1026 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AP003789.1-201ENST00000617737 605 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC130448.2-201ENST00000624082 374 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL25A1Q9BXS0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms